C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FGFR1 oncogene partner 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111663 Fgfr1op2-002 ENSMUSG00000040242 10090 + 6:146577859-146599198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111663
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111663 4.088±1.29 11.720±0.75 5.021±0.66 4.825±1.90 2.564±0.20 2.721±0.58 7.660±4.21 7.675±1.71 9.502±0.51 4.591±2.60 7.979±1.89 11.383±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XF CIL_0004XF_0002 CGP 6:146108299-146577835
CIL_0000VJ CIL_0000VJ_0002 CGP 6:146549632-146599198
CIL_0003NL CIL_0003NL_0003 CGP 6:146577203-146642824

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0009611 IEA response to wounding
GO:0042060 IMP wound healing
GO:0042803 IDA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229395 FGFR1OP2-001 protein_coding Homo_sapiens 0 955
ENST00000327214 FGFR1OP2-004 protein_coding Homo_sapiens 0 484
ENST00000395941 FGFR1OP2-006 retained_intron Homo_sapiens 0 484
ENST00000546072 FGFR1OP2-002 protein_coding Homo_sapiens 0 647
ENST00000551907 RP11-161H23.10-001 processed_pseudogene Homo_sapiens 0 407

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