C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FGFR1 oncogene partner 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000229395 FGFR1OP2-001 ENSG00000111790 9606 + 12:26938383-26966553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229395
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229395 1.937±0.00 3.766±0.00 2.486±0.14 2.338±0.28 2.313±0.00 1.596±0.87 3.271±1.95 2.006±0.55 4.136±1.06 1.572±0.02 4.712±0.64 1.863±0.61 4.169±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VJ CIL_0000VJ_0001 CGP 12:26905181-26966650
CIL_0003NL CIL_0003NL_0002 CGP 12:26938383-27014434

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0009611 IEA response to wounding
GO:0042060 IEA wound healing
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111663 Fgfr1op2-002 protein_coding Mus_musculus 0 955
ENSMUST00000160697 Fgfr1op2-006 processed_transcript Mus_musculus 0 686
ENSMUST00000058245 Fgfr1op2-004 protein_coding Mus_musculus 0 647
ENSMUST00000037836 Fgfr1op2-005 protein_coding Mus_musculus 0 647
ENSMUST00000067404 Fgfr1op2-001 protein_coding Mus_musculus 0 484
ENSMUST00000120351 Gm12312-001 processed_pseudogene Mus_musculus 0 281

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