C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 3 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112137 Msl3-002 ENSMUSG00000031358 10090 - X:168654117-168673898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000112137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000112137 6.412±0.57 2.359±1.05 10.104±1.08 4.662±0.98 5.122±1.98 5.181±2.02 9.479±1.48 7.551±1.28 6.616±2.58 4.703±1.01 6.295±2.72 9.377±5.01 1.301±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035064 ISS methylated histone binding
GO:0043984 ISS histone H4-K16 acetylation
GO:0072487 ISS MSL complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312196 MSL3-009 protein_coding Homo_sapiens 0 1513
ENST00000337339 MSL3-001 protein_coding Homo_sapiens 0 952
ENST00000361672 MSL3-201 protein_coding Homo_sapiens 0 1376
ENST00000380692 MSL3-004 protein_coding Homo_sapiens 0 854
ENST00000380693 MSL3-010 protein_coding Homo_sapiens 0 1513
ENST00000398527 MSL3-202 protein_coding Homo_sapiens 0 1513
ENST00000421368 MSL3-003 protein_coding Homo_sapiens 0 444
ENST00000444413 AP004289.2-001 processed_pseudogene Homo_sapiens 0 822
ENST00000468149 MSL3-012 nonsense_mediated_decay Homo_sapiens 0 1376
ENST00000482871 MSL3-015 retained_intron Homo_sapiens 0 375
ENST00000483645 MSL3-016 processed_transcript Homo_sapiens 0 302
ENST00000489759 RP11-365F18.3-001 processed_pseudogene Homo_sapiens 0 375
ENST00000494268 MSL3-011 retained_intron Homo_sapiens 0 638

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