C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Scm-like with four mbt domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112177 Sfmbt1-004 ENSMUSG00000006527 10090 + 14:30716491-30818346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112177 1.036±0.49 0.650±0.00 1.226±0.14 2.358±0.71 0.527±0.05 0.377±0.16 0.423±0.14 0.897±0.38 1.666±1.21 0.558±0.09 0.746±0.05 1.007±0.57 2.253±1.29 7.469±0.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA:ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007283 TAS spermatogenesis
GO:0016568 IEA chromatin modification
GO:0030154 IEA cell differentiation
GO:0042393 ISS histone binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0048635 ISS negative regulation of muscle organ development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394752 SFMBT1-001 protein_coding Homo_sapiens 0 3240
ENST00000482396 SFMBT1-005 protein_coding Homo_sapiens 0 414
ENST00000483069 SFMBT1-004 protein_coding Homo_sapiens 0 305

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