C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycoprotein m6b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112224 Gpm6b-005 ENSMUSG00000031342 10090 + X:166344692-166388988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000112224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000112224 1.008±0.37 0.660±0.29 2.481±0.08 24.707±0.00 2.032±0.00 0.753±0.00 1.078±0.34 0.566±0.07 0.226±0.11 0.316±0.16 1.603±0.36 0.479±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0005886 IDA plasma membrane
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0030501 ISS positive regulation of bone mineralization
GO:0032956 ISS regulation of actin cytoskeleton organization
GO:0045121 IDA membrane raft
GO:0051612 IDA negative regulation of serotonin uptake
GO:0051893 ISS regulation of focal adhesion assembly
GO:0085029 ISS extracellular matrix assembly
GO:2000009 IDA negative regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316715 GPM6B-003 protein_coding Homo_sapiens 0 1404
ENST00000355135 GPM6B-008 protein_coding Homo_sapiens 0 1280
ENST00000356942 GPM6B-002 protein_coding Homo_sapiens 0 1773
ENST00000398361 GPM6B-005 protein_coding Homo_sapiens 0 1194
ENST00000432046 GPM6BP2-001 unprocessed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000442797 GPM6BP3-001 processed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000446387 GPM6BP1-001 unprocessed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000454189 GPM6B-001 protein_coding Homo_sapiens 0 2056
ENST00000468080 GPM6B-011 protein_coding Homo_sapiens 0 599
ENST00000472735 GPM6B-010 protein_coding Homo_sapiens 0 429
ENST00000475307 GPM6B-004 protein_coding Homo_sapiens 0 848
ENST00000493085 GPM6B-012 protein_coding Homo_sapiens 0 660
ENST00000493677 GPM6B-007 protein_coding Homo_sapiens 0 917
ENST00000495211 GPM6B-009 protein_coding Homo_sapiens 0 652

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