C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: atlastin GTPase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112437 Atl2-202 ENSMUSG00000059811 10090 - 17:79848392-79896123 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IO CIL_0002IO_0002 CGP 17:79706953-79896123
CIL_0002IR CIL_0002IR_0002 CGP 17:79848392-80062334

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378954 ATL2-002 protein_coding Homo_sapiens 0 3312
ENST00000402054 ATL2-005 protein_coding Homo_sapiens 0 2361
ENST00000405384 ATL2-003 nonsense_mediated_decay Homo_sapiens 0 2540
ENST00000406122 ATL2-013 protein_coding Homo_sapiens 0 1882
ENST00000416222 ATL2-006 nonsense_mediated_decay Homo_sapiens 5.04467e-44 182
ENST00000419554 ATL2-001 protein_coding Homo_sapiens 0 1687
ENST00000443098 ATL2-016 protein_coding Homo_sapiens 0 468
ENST00000449130 ATL2-012 protein_coding Homo_sapiens 0 459
ENST00000451483 ATL2-007 protein_coding Homo_sapiens 0 193
ENST00000452935 ATL2-004 protein_coding Homo_sapiens 0 2004
ENST00000456736 ATL2-011 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000472097 ATL2-009 retained_intron Homo_sapiens 0 213
ENST00000474535 ATL2-010 retained_intron Homo_sapiens 0 363
ENST00000477642 ATL2-014 retained_intron Homo_sapiens 0 778
ENST00000489896 ATL2-015 retained_intron Homo_sapiens 0 675

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