C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002IR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119787-ENSG00000143889 CGP 9606 2:38294880-38603586
GeneTranscriptPositionBiotype
ENSG00000119787 (ATL2)
atlastin GTPase 2 		ENST00000378954 (ATL2-002) 38294880-38377262 protein_coding
ENST00000402054 (ATL2-005) 38295609-38376224 protein_coding
ENST00000405384 (ATL2-003) 38295609-38377273 nonsense_mediated_decay
ENST00000406122 (ATL2-013) 38295154-38377285 protein_coding
ENST00000416222 (ATL2-006) 38343297-38377273 nonsense_mediated_decay
ENST00000419554 (ATL2-001) 38295901-38377273 protein_coding
ENST00000443098 (ATL2-016) 38309431-38377256 protein_coding
ENST00000449130 (ATL2-012) 38309378-38377261 protein_coding
ENST00000451483 (ATL2-007) 38318937-38377279 protein_coding
ENST00000452935 (ATL2-004) 38295908-38376594 protein_coding
ENST00000456736 (ATL2-011) 38314609-38377262 nonsense_mediated_decay
ENST00000472097 (ATL2-009) 38318835-38377273 retained_intron
ENST00000474535 (ATL2-010) 38318326-38343415 retained_intron
ENST00000477642 (ATL2-014) 38297931-38300318 retained_intron
ENST00000486927 (ATL2-008) 38343294-38359604 processed_transcript
ENST00000489896 (ATL2-015) 38298218-38300433 retained_intron
ENSG00000143889 (HNRNPLL)
heterogeneous nuclear ribonucleoprotein L-like 		ENST00000272249 (HNRNPLL-005) 38563508-38591641 nonsense_mediated_decay
ENST00000358367 (HNRNPLL-201) 38563186-38603036 protein_coding
ENST00000378915 (HNRNPLL-202) 38563186-38602626 protein_coding
ENST00000409328 (HNRNPLL-010) 38564032-38602857 protein_coding
ENST00000409636 (HNRNPLL-002) 38561978-38603029 protein_coding
ENST00000410076 (HNRNPLL-004) 38581075-38602929 protein_coding
ENST00000425682 (HNRNPLL-007) 38583843-38600026 protein_coding
ENST00000441689 (HNRNPLL-008) 38568079-38569836 protein_coding
ENST00000449105 (HNRNPLL-001) 38561978-38602966 protein_coding
ENST00000488099 (HNRNPLL-006) 38581815-38585747 retained_intron
ENST00000498516 (HNRNPLL-003) 38591576-38603586 processed_transcript
ENST00000608859 (HNRNPLL-203) 38563186-38603036 protein_coding
ENSG00000213553 (RPLP0P6)
ribosomal protein, large, P0 pseudogene 6 		ENST00000394878 (RPLP0P6-001) 38481851-38482804 processed_pseudogene
ENSG00000231367 (AC016995.3)
 ENST00000413227 (AC016995.3-002) 38458646-38469441 lincRNA
ENST00000417039 (AC016995.3-001) 38406728-38515740 lincRNA
ENST00000421463 (AC016995.3-005) 38458643-38483093 lincRNA
ENST00000437979 (AC016995.3-003) 38458637-38463114 lincRNA
ENST00000438085 (AC016995.3-004) 38406719-38417927 lincRNA
ENSG00000235009 (AC093822.1)
 ENST00000457385 (AC093822.1-001) 38431294-38433573 lincRNA
ENSG00000235586 (AC011247.3)
 ENST00000457097 (AC011247.3-001) 38601598-38602178 antisense
ENSG00000271443 (RP11-541E12.1)
 ENST00000603297 (RP11-541E12.1-001) 38535258-38535695 transcribed_processed_pseudogene
ENST00000605062 (RP11-541E12.1-002) 38535568-38536249 processed_transcript
CIL_0002IR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059811-ENSMUSG00000024095 CGP 10090 17:79848392-80062334
GeneTranscriptPositionBiotype
ENSMUSG00000024095 (Hnrnpll)
heterogeneous nuclear ribonucleoprotein L-like 		ENSMUST00000061331 (Hnrnpll-201) 80029487-80062334 protein_coding
ENSMUST00000183516 (Hnrnpll-006) 80030341-80035556 retained_intron
ENSMUST00000184297 (Hnrnpll-005) 80029837-80062227 nonsense_mediated_decay
ENSMUST00000184578 (Hnrnpll-004) 80037149-80062194 retained_intron
ENSMUST00000184635 (Hnrnpll-001) 80029487-80062227 protein_coding
ENSMUST00000184726 (Hnrnpll-002) 80051235-80062268 retained_intron
ENSMUST00000184889 (Hnrnpll-003) 80045049-80062135 retained_intron
ENSMUSG00000059811 (Atl2)
atlastin GTPase 2 		ENSMUST00000068282 (Atl2-201) 79848392-79896028 protein_coding
ENSMUST00000112437 (Atl2-202) 79848392-79896123 protein_coding
ENSMUSG00000088183 (Gm22215)
predicted gene, 22215 		ENSMUST00000157558 (Gm22215-201) 80033514-80033609 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IR_0001ENSG00000119787ENST00000378954ENST00000405384ENST00000419554ENST00000452935ENST00000472097ENSG00000143889ENST00000272249ENST00000358367ENST00000409328ENST00000409636ENST00000410076ENST00000425682ENST00000441689ENST00000449105ENSG00000213553ENST00000394878ENSG00000231367ENST00000413227ENST00000417039ENST00000421463ENST00000437979ENST00000438085ENSG00000235009ENST00000457385ENSG00000235586ENST00000457097ENSG00000271443ENST00000603297ENST00000605062CIL_0002IR_0002ENSMUSG00000024095ENSMUST00000061331ENSMUST00000184297ENSMUST00000184578ENSMUST00000184635ENSMUST00000184889ENSMUSG00000059811ENSMUST00000068282ENSMUSG00000088183ENSMUST00000157558
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119787 ENST00000378954 3.565±0.00 3.547±0.00 4.094±0.00 3.481±1.33 7.583±2.06 8.419±3.42 3.653±1.55 6.573±1.84 8.606±3.80 4.495±2.04 5.725±0.50 12.717±5.51 3.903±0.30 9.171±0.00
ENST00000402054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405384 2.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419554 N/A N/A N/A N/A 2.148±0.00 N/A N/A 3.165±0.00 3.565±0.00 4.454±0.00 N/A 7.487±0.00 1.198±0.00 3.844±0.00
ENST00000443098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452935 N/A N/A N/A N/A 2.745±0.00 3.276±0.00 2.021±0.00 N/A N/A 3.513±0.00 N/A N/A N/A N/A
ENST00000456736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.399±0.00 9.745±0.00
ENST00000474535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143889 ENST00000272249 1.398±0.00 1.342±0.00 0.788±0.00 N/A 1.171±0.24 1.926±0.00 0.936±0.20 2.159±0.00 0.358±0.00 2.160±0.00 1.317±0.00 2.895±1.10 N/A 6.351±0.00
ENST00000358367 N/A N/A N/A N/A N/A 1.740±0.00 N/A N/A N/A N/A N/A 1.192±0.00 N/A 3.436±0.00
ENST00000378915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409328 7.494±0.00 5.115±0.00 N/A 6.053±0.00 6.786±0.00 6.703±0.00 2.948±2.23 5.591±0.00 3.014±0.00 13.560±0.00 2.745±1.00 8.188±2.50 5.816±2.89 20.056±0.40
ENST00000409636 0.746±0.00 1.129±0.00 N/A 0.818±0.00 0.993±0.00 0.683±0.00 0.664±0.00 0.771±0.00 0.320±0.00 N/A 0.633±0.00 2.413±0.62 N/A 2.908±0.00
ENST00000410076 N/A N/A 0.671±0.00 2.416±0.00 1.763±0.00 2.146±0.00 N/A N/A N/A N/A N/A 3.763±0.00 N/A N/A
ENST00000425682 N/A N/A N/A N/A N/A N/A N/A 1.158±0.00 N/A N/A N/A N/A N/A N/A
ENST00000441689 N/A N/A N/A N/A N/A N/A N/A 1.145±0.00 N/A N/A N/A N/A N/A N/A
ENST00000449105 0.734±0.00 N/A 0.722±0.00 2.209±0.02 1.258±0.65 1.076±0.13 N/A 1.654±0.00 2.815±0.00 0.961±0.29 0.353±0.00 2.999±0.00 1.318±0.39 N/A
ENST00000488099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213553 ENST00000394878 N/A N/A N/A 0.023±0.00 0.117±0.00 0.251±0.08 0.036±0.00 0.069±0.00 N/A N/A 0.294±0.08 1.425±0.85 0.424±0.17 0.150±0.02
ENSG00000231367 ENST00000413227 N/A N/A N/A 0.058±0.00 N/A N/A N/A 0.246±0.00 N/A 0.097±0.00 N/A 0.531±0.18 N/A 1.081±0.00
ENST00000417039 0.160±0.00 0.139±0.00 N/A 0.030±0.00 0.799±0.65 0.241±0.00 0.117±0.00 N/A 0.097±0.00 0.109±0.00 N/A 0.345±0.15 N/A 0.376±0.02
ENST00000421463 0.163±0.00 N/A N/A 0.056±0.00 N/A 0.260±0.00 N/A N/A 0.769±0.00 N/A N/A 0.302±0.00 N/A N/A
ENST00000437979 N/A N/A N/A N/A N/A 0.789±0.00 N/A N/A N/A N/A N/A 0.468±0.00 N/A N/A
ENST00000438085 N/A 0.165±0.00 N/A N/A N/A 0.874±0.42 0.035±0.00 0.264±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000235009 ENST00000457385 N/A 0.140±0.00 N/A N/A 0.048±0.00 N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A 1.101±0.08
ENSG00000235586 ENST00000457097 0.156±0.00 N/A N/A N/A N/A 0.352±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271443 ENST00000603297 0.062±0.00 0.269±0.00 N/A N/A N/A 0.268±0.00 N/A N/A 1.554±0.00 N/A N/A N/A N/A 0.128±0.00
ENST00000605062 N/A 0.092±0.00 N/A 0.068±0.01 N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.165±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024095 ENSMUST00000061331 N/A N/A N/A N/A N/A 2.026±0.00 N/A 1.076±0.00 N/A N/A N/A N/A N/A 8.421±0.00
ENSMUST00000183516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184297 4.780±1.01 7.395±5.53 8.177±1.14 9.144±5.68 4.386±1.35 7.677±3.18 2.026±0.53 3.539±1.64 4.306±2.62 6.833±2.56 2.288±0.51 10.049±7.65 8.470±2.31 13.677±6.45
ENSMUST00000184578 2.355±0.53 2.560±0.13 N/A N/A 1.922±0.29 N/A N/A N/A 1.263±0.33 N/A N/A 3.555±0.11 N/A N/A
ENSMUST00000184635 6.718±1.65 N/A 10.681±0.41 17.781±9.73 2.587±0.80 4.232±1.92 3.428±0.51 5.610±0.54 9.554±6.23 8.819±1.29 3.683±0.39 6.554±1.84 9.581±5.07 9.937±4.45
ENSMUST00000184726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.206±0.00 0.384±0.00 N/A
ENSMUSG00000059811 ENSMUST00000068282 13.722±2.31 23.065±3.49 9.586±0.32 5.516±1.85 11.906±1.65 14.378±4.34 9.779±0.87 12.520±0.74 18.550±6.72 7.261±2.32 47.987±10.23 12.745±4.66 11.094±4.09 11.656±3.62
ENSMUST00000112437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088183 ENSMUST00000157558 N/A N/A 612.546±0.00 237.883±0.00 N/A N/A N/A N/A N/A N/A N/A 13798.600±0.00 N/A N/A

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