C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activin A receptor, type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112599 Acvr1-001 ENSMUSG00000026836 10090 - 2:58446434-58516272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112599
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112599 1.392±0.53 5.360±0.65 6.972±0.00 4.015±0.86 1.456±0.53 2.096±0.62 1.835±0.78 1.206±0.72 2.303±0.92 2.847±1.02 2.341±0.65 3.947±1.20 1.915±0.52 0.736±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000752 CIL_000752_0002 CGP 2:58267453-58567157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001569 IMP patterning of blood vessels
GO:0001701 IMP in utero embryonic development
GO:0001702 IMP gastrulation with mouth forming second
GO:0001707 IMP mesoderm formation
GO:0001755 IMP neural crest cell migration
GO:0002526 IEP acute inflammatory response
GO:0005025 IDA transforming growth factor beta receptor activity, type I
GO:0005524 IEA ATP binding
GO:0005887 IDA integral component of plasma membrane
GO:0007179 IDA transforming growth factor beta receptor signaling pathway
GO:0007281 IMP germ cell development
GO:0007368 IMP determination of left/right symmetry
GO:0007369 IMP gastrulation
GO:0007498 IMP mesoderm development
GO:0007507 IMP heart development
GO:0016361 IDA activin receptor activity, type I
GO:0019838 IDA growth factor binding
GO:0032924 IDA activin receptor signaling pathway
GO:0045177 IDA apical part of cell
GO:0046872 IEA metal ion binding
GO:0048185 IPI activin binding
GO:0050431 IDA transforming growth factor beta binding
GO:0051145 IMP smooth muscle cell differentiation
GO:0060037 IMP pharyngeal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000027129 bmpr1ba-001 protein_coding Danio_rerio 9e-18 97
ENST00000263640 ACVR1-001 protein_coding Homo_sapiens 0 3192
ENST00000409283 ACVR1-003 protein_coding Homo_sapiens 0 3190
ENST00000410057 ACVR1-009 protein_coding Homo_sapiens 0 2204
ENST00000412025 ACVR1-007 protein_coding Homo_sapiens 0 355
ENST00000424669 ACVR1-004 protein_coding Homo_sapiens 0 285
ENST00000434821 ACVR1-201 protein_coding Homo_sapiens 0 3186
ENST00000440523 ACVR1-005 protein_coding Homo_sapiens 0 351
ENST00000487456 ACVR1-008 processed_transcript Homo_sapiens 0 599
ENST00000539637 ACVR1-002 protein_coding Homo_sapiens 0 291

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