C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secreted phosphoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112748 Spp1-003 ENSMUSG00000029304 10090 + 5:104435121-104441047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryENSMUST00000112748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary
ENSMUST00000112748 0.329±0.17 2.931±0.00 0.050±0.00 0.852±0.00 0.432±0.00 0.307±0.00 0.141±0.00 1.837±0.00 0.436±0.00 3.810±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BJ CIL_0000BJ_0002 CGP 5:104325329-104441050
CIL_0000BK CIL_0000BK_0002 CGP 5:104435118-104505819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 NAS cytokine activity
GO:0005576 NAS extracellular region
GO:0005737 IDA cytoplasm
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030593 IDA neutrophil chemotaxis
GO:0031214 IEA biomineral tissue development
GO:0043066 NAS negative regulation of apoptotic process
GO:0045177 IDA apical part of cell
GO:0050840 IDA extracellular matrix binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237623 SPP1-002 protein_coding Homo_sapiens 1e-24 119
ENST00000395080 SPP1-001 protein_coding Homo_sapiens 0 237
ENST00000505146 SPP1-011 retained_intron Homo_sapiens 5e-25 117
ENST00000508002 SPP1-006 retained_intron Homo_sapiens 8.99998e-41 171
ENST00000509334 SPP1-009 processed_transcript Homo_sapiens 0.0000000000008 79
ENST00000509659 SPP1-004 processed_transcript Homo_sapiens 0 196
ENST00000513981 SPP1-008 processed_transcript Homo_sapiens 0 196
ENST00000614857 SPP1-201 protein_coding Homo_sapiens 0 231

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