C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: midline 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112993 Mid2-201 ENSMUSG00000000266 10090 + X:140678028-140767715 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112993
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112993 1.783±0.91 1.669±0.58 0.812±0.00 1.536±0.25 2.280±0.36 1.957±0.00 0.688±0.17 1.911±0.99 0.522±0.35 5.674±1.14 0.796±0.00 2.251±0.82 0.439±0.13 0.257±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JH CIL_0006JH_0002 CGP X:140664599-140813433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0008017 IEA microtubule binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0032897 IEA negative regulation of viral transcription
GO:0035372 IEA protein localization to microtubule
GO:0042803 IEA protein homodimerization activity
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 IEA innate immune response
GO:0046597 IEA negative regulation of viral entry into host cell
GO:0046982 IEA protein heterodimerization activity
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity
GO:0051219 IEA phosphoprotein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1902187 IEA negative regulation of viral release from host cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262843 MID2-001 protein_coding Homo_sapiens 0 2032
ENST00000443968 MID2-002 protein_coding Homo_sapiens 0 3210
ENST00000451923 MID2-003 protein_coding Homo_sapiens 0 1018
ENST00000474517 MID2-004 retained_intron Homo_sapiens 0 767

Loading