C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 128
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113027 Rnf128-003 ENSMUSG00000031438 10090 + X:139563316-139673138 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLungOvaryTestisENSMUST00000113027
Transcript ID Adipose Bladder Lung Ovary Testis
ENSMUST00000113027 7.485±5.37 31.385±6.05 0.514±0.00 10.146±6.99 0.545±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A1 CIL_0006A1_0002 CGP X:139480367-139673145
CIL_0006AC CIL_0006AC_0002 CGP X:139563316-139753405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005770 IDA late endosome
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0008270 IEA zinc ion binding
GO:0016567 IDA protein ubiquitination
GO:0042036 IDA negative regulation of cytokine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255499 RNF128-001 protein_coding Homo_sapiens 0 1951
ENST00000324342 RNF128-002 protein_coding Homo_sapiens 0 2538
ENST00000418562 RNF128-003 protein_coding Homo_sapiens 0 946

Loading