C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 128
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031438 Rnf128 10090 + X:139563316-139673145 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113026 Rnf128-001 139610620-139673145 protein_coding
  ENSMUST00000113027 Rnf128-003 139563316-139673138 protein_coding
  ENSMUST00000113029 Rnf128-002 139611367-139671741 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113026ENSMUST00000113027ENSMUST00000113029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113026 3.180±3.07 49.939±23.74 11.204±1.07 0.747±0.29 1.744±0.40 30.835±2.02 10.332±1.36 24.946±5.47 25.714±8.74 1.225±0.32 4.967±0.45 20.621±9.05 70.473±15.25 1.011±0.39
ENSMUST00000113027 7.485±5.37 N/A 31.385±6.05 N/A N/A N/A N/A N/A N/A 0.514±0.00 N/A 10.146±6.99 N/A 0.545±0.36
ENSMUST00000113029 N/A N/A N/A 2.080±0.00 0.496±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A1 CIL_0006A1_0002 CGP X:139480367-139673145
CIL_0006AC CIL_0006AC_0002 CGP X:139563316-139753405

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005770 IDA late endosome
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0042036 IDA negative regulation of cytokine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016867 rnf128a ring finger protein 128a protein_coding Danio_rerio
ENSDARG00000029890 si:dkeyp-86f7.4 si:dkeyp-86f7.4 protein_coding Danio_rerio
ENSG00000133135 RNF128 ring finger protein 128, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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