C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113117 Brpf1-002 ENSMUSG00000001632 10090 + 6:113307224-113324841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113117
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113117 1.576±0.36 1.150±0.21 2.399±1.14 1.686±0.39 1.155±0.23 1.323±0.00 1.008±0.26 1.820±1.06 1.488±0.17 0.550±0.19 4.628±2.51 3.833±1.97 2.008±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Z CIL_00035Z_0002 CGP 6:113282307-113324857
CIL_0002WL CIL_0002WL_0002 CGP 6:113307181-113335068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013083 brd1a-201 protein_coding Danio_rerio 0.000000000000008 88
ENSDART00000145083 brd1a-001 protein_coding Danio_rerio 0.000000000000008 88
ENST00000383829 BRPF1-001 protein_coding Homo_sapiens 0 4311
ENST00000420291 BRPF1-005 protein_coding Homo_sapiens 0 442
ENST00000424362 BRPF1-003 protein_coding Homo_sapiens 0 4396
ENST00000426583 BRPF1-006 protein_coding Homo_sapiens 0 457
ENST00000433861 BRPF1-002 protein_coding Homo_sapiens 0 3480
ENST00000457855 BRPF1-004 protein_coding Homo_sapiens 0 4388
ENST00000469066 BRPF1-008 processed_transcript Homo_sapiens 0 261
ENST00000497565 BRPF1-007 retained_intron Homo_sapiens 0 1013

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