C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113119 Brpf1-001 ENSMUSG00000001632 10090 + 6:113307192-113324702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000113119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000113119 2.362±0.91 3.085±0.29 1.888±0.06 3.443±0.82 3.653±1.29 2.704±0.76 0.799±0.02 1.667±0.62 2.102±0.49 2.938±0.59 0.680±0.29 3.020±0.97 1.925±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Z CIL_00035Z_0002 CGP 6:113282307-113324857
CIL_0002WL CIL_0002WL_0002 CGP 6:113307181-113335068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0043966 IEA histone H3 acetylation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0070776 IEA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013083 brd1a-201 protein_coding Danio_rerio 0.000000000000008 88
ENSDART00000145083 brd1a-001 protein_coding Danio_rerio 0.000000000000008 88
ENST00000383829 BRPF1-001 protein_coding Homo_sapiens 0 4571
ENST00000420291 BRPF1-005 protein_coding Homo_sapiens 0 440
ENST00000424362 BRPF1-003 protein_coding Homo_sapiens 0 4634
ENST00000426583 BRPF1-006 protein_coding Homo_sapiens 0 455
ENST00000433861 BRPF1-002 protein_coding Homo_sapiens 0 3740
ENST00000457855 BRPF1-004 protein_coding Homo_sapiens 0 4401
ENST00000469066 BRPF1-008 processed_transcript Homo_sapiens 0 261
ENST00000497565 BRPF1-007 retained_intron Homo_sapiens 0 1013

Loading