C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113121 Brpf1-004 ENSMUSG00000001632 10090 + 6:113307192-113324721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113121
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113121 2.342±0.81 2.325±0.66 3.240±0.19 2.726±0.98 2.873±0.95 1.449±0.45 1.792±0.63 1.869±0.75 2.326±0.02 0.517±0.15 3.198±1.09 5.403±2.28 2.358±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Z CIL_00035Z_0002 CGP 6:113282307-113324857
CIL_0002WL CIL_0002WL_0002 CGP 6:113307181-113335068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013083 brd1a-201 protein_coding Danio_rerio 0.000000000000008 88
ENSDART00000145083 brd1a-001 protein_coding Danio_rerio 0.000000000000008 88
ENST00000383829 BRPF1-001 protein_coding Homo_sapiens 0 5659
ENST00000420291 BRPF1-005 protein_coding Homo_sapiens 0 440
ENST00000424362 BRPF1-003 protein_coding Homo_sapiens 0 5723
ENST00000426583 BRPF1-006 protein_coding Homo_sapiens 0 455
ENST00000433861 BRPF1-002 protein_coding Homo_sapiens 0 3740
ENST00000457855 BRPF1-004 protein_coding Homo_sapiens 0 5491
ENST00000469066 BRPF1-008 processed_transcript Homo_sapiens 0 261
ENST00000497565 BRPF1-007 retained_intron Homo_sapiens 0 525

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