C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113122 Brpf1-003 ENSMUSG00000001632 10090 + 6:113307181-113324857 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113122
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113122 1.688±0.70 2.497±0.62 3.799±0.54 4.888±0.08 3.377±1.25 2.339±1.01 0.986±0.34 1.370±0.67 2.328±0.86 2.651±0.82 1.899±0.45 4.360±1.69 4.603±2.02 1.727±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Z CIL_00035Z_0002 CGP 6:113282307-113324857
CIL_0002WL CIL_0002WL_0002 CGP 6:113307181-113335068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013083 brd1a-201 protein_coding Danio_rerio 0.000000000000008 88
ENSDART00000145083 brd1a-001 protein_coding Danio_rerio 0.000000000000008 88
ENST00000383829 BRPF1-001 protein_coding Homo_sapiens 0 5762
ENST00000420291 BRPF1-005 protein_coding Homo_sapiens 0 440
ENST00000424362 BRPF1-003 protein_coding Homo_sapiens 0 5847
ENST00000426583 BRPF1-006 protein_coding Homo_sapiens 0 455
ENST00000433861 BRPF1-002 protein_coding Homo_sapiens 0 3746
ENST00000457855 BRPF1-004 protein_coding Homo_sapiens 0 5565
ENST00000469066 BRPF1-008 processed_transcript Homo_sapiens 0 261
ENST00000497565 BRPF1-007 retained_intron Homo_sapiens 0 525

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