C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3A interacting protein (rabin3)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113161 Rab3il1-004 ENSMUSG00000024663 10090 + 19:10018193-10035456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113161 8.093±0.68 1.560±0.48 5.343±0.00 3.121±0.54 9.462±1.07 2.405±0.60 2.048±0.89 6.881±1.57 18.510±19.78 2.609±0.99 1.117±0.46 5.657±2.36 6.484±4.72 48.640±13.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000056 CIL_000056_0002 CGP 19:9985174-10038380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0015031 IEA protein transport
GO:0017112 ISS Rab guanyl-nucleotide exchange factor activity
GO:0032851 ISS positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301773 RAB3IL1-002 protein_coding Homo_sapiens 0 363
ENST00000394836 RAB3IL1-001 protein_coding Homo_sapiens 0 1227
ENST00000531922 RAB3IL1-003 protein_coding Homo_sapiens 0 603

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