C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HOP homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113453 Hopx-002 ENSMUSG00000059325 10090 - 5:77086988-77095277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000113453
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000113453 2.195±1.16 0.687±0.22 5.357±0.00 4.205±1.31 4.357±1.36 15.257±2.98 3.300±0.49 8.046±5.61 1.456±0.42 2.514±1.43 7.540±5.12 3.013±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G9 CIL_0008G9_0002 VISTA 5:76829880-77430993
CIL_0001WR CIL_0001WR_0002 CGP 5:77016023-77115121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001829 IMP trophectodermal cell differentiation
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IMP heart development
GO:0008016 IMP regulation of heart contraction
GO:0016575 IGI histone deacetylation
GO:0043393 IDA regulation of protein binding
GO:0043415 IMP positive regulation of skeletal muscle tissue regeneration
GO:0048286 IMP lung alveolus development
GO:0051155 IMP positive regulation of striated muscle cell differentiation

Homologs

No Homologs available.

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