C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113470 Prdm12-001 ENSMUSG00000079466 10090 + 2:31640037-31655795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverPlacentaTestisENSMUST00000113470
Transcript ID Adrenal Brain Heart Liver Placenta Testis
ENSMUST00000113470 0.024±0.01 1.987±1.42 0.010±0.00 0.002±0.00 0.004±0.00 0.037±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0002 VISTA 2:31199311-31800827
CIL_0008XQ CIL_0008XQ_0002 VISTA 2:31340644-31941311
CIL_0006I8 CIL_0006I8_0002 CGP 2:31572651-31655795
CIL_0006IB CIL_0006IB_0002 CGP 2:31640037-31681350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008168 IEA methyltransferase activity
GO:0022008 IDA neurogenesis
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000022348 prdm12b-201 protein_coding Danio_rerio 0 704
ENST00000253008 PRDM12-001 protein_coding Homo_sapiens 0 1511

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