C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130711-ENSG00000130713 CGP 9606 9:130664594-130704894
GeneTranscriptPositionBiotype
ENSG00000130711 (PRDM12)
PR domain containing 12 		ENST00000253008 (PRDM12-001) 130664594-130682981 protein_coding
ENSG00000130713 (EXOSC2)
exosome component 2 		ENST00000372350 (EXOSC2-005) 130693787-130702293 protein_coding
ENST00000372351 (EXOSC2-002) 130693786-130704861 protein_coding
ENST00000372352 (EXOSC2-006) 130693780-130704861 protein_coding
ENST00000372358 (EXOSC2-001) 130693721-130704861 protein_coding
ENST00000430138 (EXOSC2-007) 130693775-130704861 processed_transcript
ENST00000463488 (EXOSC2-010) 130693806-130699681 processed_transcript
ENST00000467138 (EXOSC2-008) 130700842-130704861 processed_transcript
ENST00000490641 (EXOSC2-009) 130693780-130699791 processed_transcript
ENST00000491115 (EXOSC2-004) 130693721-130703774 processed_transcript
ENST00000495699 (EXOSC2-003) 130693806-130703181 protein_coding
ENST00000546165 (EXOSC2-201) 130693760-130704894 protein_coding
CIL_0006IB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079466-ENSMUSG00000039356 CGP 10090 2:31640037-31681350
GeneTranscriptPositionBiotype
ENSMUSG00000039356 (Exosc2)
exosome component 2 		ENSMUST00000038474 (Exosc2-001) 31670715-31681350 protein_coding
ENSMUST00000125883 (Exosc2-003) 31670743-31678460 processed_transcript
ENSMUST00000137156 (Exosc2-005) 31670734-31680519 protein_coding
ENSMUST00000146135 (Exosc2-004) 31673256-31678533 processed_transcript
ENSMUST00000149094 (Exosc2-002) 31670723-31676102 processed_transcript
ENSMUSG00000079466 (Prdm12)
PR domain containing 12 		ENSMUST00000113470 (Prdm12-001) 31640037-31655795 protein_coding
ENSMUSG00000083143 (Gm13424)
predicted gene 13424 		ENSMUST00000122301 (Gm13424-001) 31660470-31661427 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IB_0001ENSG00000130711ENST00000253008ENSG00000130713ENST00000372350ENST00000372351ENST00000372352ENST00000372358ENST00000430138ENST00000463488ENST00000467138ENST00000490641ENST00000491115ENST00000495699ENST00000546165CIL_0006IB_0002ENSMUSG00000039356ENSMUST00000038474ENSMUST00000125883ENSMUST00000137156ENSMUST00000146135ENSMUST00000149094ENSMUSG00000079466ENSMUST00000113470ENSMUSG00000083143ENSMUST00000122301
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IB_0001ENSG00000130711ENST00000253008ENSG00000130713ENST00000372350ENST00000372351ENST00000372352ENST00000372358ENST00000430138ENST00000467138ENST00000495699ENST00000546165CIL_0006IB_0002ENSMUSG00000039356ENSMUST00000038474ENSMUSG00000079466ENSMUST00000113470ENSMUSG00000083143ENSMUST00000122301
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130711 ENST00000253008 N/A 0.033±0.00 N/A 0.139±0.12 N/A 0.021±0.00 N/A N/A N/A N/A N/A 0.060±0.00 N/A 0.066±0.02
ENSG00000130713 ENST00000372350 N/A N/A N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A 1.910±0.00 N/A N/A N/A
ENST00000372351 N/A 2.707±0.00 0.500±0.00 N/A N/A 0.428±0.00 N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A
ENST00000372352 N/A N/A N/A N/A N/A 1.889±0.00 N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A
ENST00000372358 2.563±0.00 N/A 0.560±0.00 3.560±0.25 1.731±0.40 1.866±0.00 0.806±0.35 2.250±0.00 3.288±0.87 1.636±0.33 4.130±0.00 4.975±1.85 5.997±1.24 2.370±0.94
ENST00000430138 0.626±0.00 4.038±0.00 N/A 1.409±0.00 0.947±0.01 0.603±0.00 N/A N/A N/A N/A 0.727±0.00 2.215±0.35 N/A 1.591±0.00
ENST00000463488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467138 N/A 2.120±0.00 0.578±0.00 N/A 0.688±0.00 0.631±0.03 0.521±0.00 N/A 0.425±0.00 0.651±0.07 N/A 1.999±0.14 N/A 0.793±0.00
ENST00000490641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495699 3.089±0.00 N/A N/A N/A 3.979±0.00 N/A 0.898±0.47 3.215±0.00 2.137±0.00 2.603±0.00 6.045±0.00 5.013±0.00 6.503±0.00 N/A
ENST00000546165 N/A N/A N/A N/A 0.858±0.00 N/A N/A N/A N/A 0.726±0.20 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039356 ENSMUST00000038474 N/A N/A N/A 12.929±2.42 N/A N/A N/A N/A 23.092±9.46 N/A 5.173±0.68 15.184±0.90 15.343±6.79 4.074±0.00
ENSMUST00000125883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079466 ENSMUST00000113470 N/A 0.024±0.01 N/A 1.987±1.42 N/A N/A 0.010±0.00 N/A 0.002±0.00 N/A N/A N/A 0.004±0.00 0.037±0.02
ENSMUSG00000083143 ENSMUST00000122301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.00

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