C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exocyst complex component 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113493 Exoc1-002 ENSMUSG00000036435 10090 + 5:76529323-76570285 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENSMUST00000113493
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000113493 1.736±0.49 13.976±0.41 0.845±0.04 1.795±0.27 2.434±1.20 1.288±0.48 1.051±0.00 1.429±0.25 2.210±0.76 0.924±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025E CIL_00025E_0002 CGP 5:76333495-76570294
CIL_00084Q CIL_00084Q_0002 VISTA 5:76362343-76966797
CIL_00025H CIL_00025H_0002 CGP 5:76529311-76646466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346134 EXOC1-001 protein_coding Homo_sapiens 0 3192
ENST00000349598 EXOC1-002 protein_coding Homo_sapiens 0 1580
ENST00000381295 EXOC1-003 protein_coding Homo_sapiens 0 3184
ENST00000504321 EXOC1-008 retained_intron Homo_sapiens 0 496
ENST00000505501 EXOC1-004 retained_intron Homo_sapiens 0 553
ENST00000506936 EXOC1-009 retained_intron Homo_sapiens 0 383
ENST00000509302 EXOC1-007 retained_intron Homo_sapiens 0 470
ENST00000511971 EXOC1-006 retained_intron Homo_sapiens 0 1413

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