C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase, AMP-activated, gamma 3 non-catatlytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113672 Prkag3-002 ENSMUSG00000006542 10090 - 1:74740205-74748577 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverOvaryPlacentaTestisENSMUST00000113672
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Ovary Placenta Testis
ENSMUST00000113672 0.548±0.48 0.168±0.00 0.094±0.00 0.074±0.00 0.093±0.02 0.163±0.00 0.008±0.01 0.095±0.00 0.015±0.00 0.088±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064U CIL_00064U_0002 CGP 1:74713574-74749221
CIL_0006OQ CIL_0006OQ_0002 CGP 1:74738922-74785322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0005978 IMP glycogen biosynthetic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0015758 IMP glucose transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233944 PRKAG3-001 nonsense_mediated_decay Homo_sapiens 0 1559
ENST00000439262 PRKAG3-201 protein_coding Homo_sapiens 0 1559
ENST00000470307 PRKAG3-003 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000490971 PRKAG3-002 retained_intron Homo_sapiens 0 628
ENST00000529249 PRKAG3-006 protein_coding Homo_sapiens 0 1559

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