C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin superfamily, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113795 Igsf5-007 ENSMUSG00000000159 10090 + 16:96361794-96525580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverOvaryPlacentaENSMUST00000113795
Transcript ID Breast Colon Heart Liver Ovary Placenta
ENSMUST00000113795 0.255±0.08 6.055±2.34 0.136±0.00 3.557±2.00 1.056±0.27 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GD CIL_0003GD_0002 CGP 16:96235801-96525580

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005923 IDA tight junction
GO:0009986 IDA cell surface
GO:0016337 IDA single organismal cell-cell adhesion
GO:0030165 IDA PDZ domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328619 PCP4-001 protein_coding Homo_sapiens 0 274
ENST00000462224 PCP4-002 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000467565 PCP4-003 processed_transcript Homo_sapiens 0 233
ENST00000468717 PCP4-004 processed_transcript Homo_sapiens 0 274

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