C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Purkinje cell protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328619 PCP4-001 ENSG00000183036 9606 + 21:39867317-39929397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328619
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328619 0.368±0.00 0.346±0.00 36.311±27.07 0.267±0.14 17.449±17.41 0.960±0.00 20.729±0.00 17.749±0.00 0.049±0.00 0.183±0.00 1.830±1.62 0.637±0.51 12.185±11.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CU CIL_0001CU_0002 CGP 21:39745407-39929397
CIL_0001CT CIL_0001CT_0002 CGP 21:39867317-40847139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IEA calmodulin binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0007417 TAS central nervous system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061739 Pcp4-001 protein_coding Mus_musculus 0 610
ENSMUST00000113795 Igsf5-007 protein_coding Mus_musculus 0 274

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