C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serologically defined colon cancer antigen 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114102 Sdccag3-002 ENSMUSG00000026927 10090 - 2:26382802-26389316 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungOvaryTestisENSMUST00000114102
Transcript ID Adrenal Breast Colon Heart Liver Lung Ovary Testis
ENSMUST00000114102 33.749±18.00 12.407±3.35 12.628±0.00 3.679±0.00 2.803±0.00 7.833±1.62 16.009±4.43 123.675±19.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0003 CGP 2:26362765-26389316
CIL_00034J CIL_00034J_0002 CGP 2:26382802-26397122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298537 SDCCAG3-001 protein_coding Homo_sapiens 0 252
ENST00000326105 SDCCAG3P2-001 processed_pseudogene Homo_sapiens 0 736
ENST00000357365 SDCCAG3-002 protein_coding Homo_sapiens 0 1046
ENST00000446833 SDCCAG3-006 protein_coding Homo_sapiens 0 211

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