C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin regulated spectrin-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114167 Camsap1-001 ENSMUSG00000026933 10090 - 2:25926838-25983282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114167 0.617±0.26 0.380±0.05 1.059±0.16 8.214±5.79 1.120±0.02 0.443±0.14 1.461±0.29 1.034±0.35 0.912±0.44 1.308±0.30 2.431±0.85 1.005±0.42 1.171±0.45 14.752±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EV CIL_0001EV_0002 CGP 2:25863795-25983282
CIL_0001F1 CIL_0001F1_0002 CGP 2:25926838-26021747

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IEA calmodulin binding
GO:0005874 IEA microtubule
GO:0007010 IEA cytoskeleton organization
GO:0022604 IEA regulation of cell morphogenesis
GO:0030507 IEA spectrin binding
GO:0031175 IEA neuron projection development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000082776 camsap1b-201 protein_coding Danio_rerio 0 359
ENSDART00000147707 camsap1b-001 protein_coding Danio_rerio 0 359
ENST00000312405 CAMSAP1-010 protein_coding Homo_sapiens 0 2909
ENST00000389532 CAMSAP1-001 protein_coding Homo_sapiens 0 4069
ENST00000409386 CAMSAP1-002 protein_coding Homo_sapiens 0 3131
ENST00000460094 CAMSAP1-006 processed_transcript Homo_sapiens 0 392
ENST00000468150 CAMSAP1-009 processed_transcript Homo_sapiens 0 231
ENST00000482664 CAMSAP1-005 retained_intron Homo_sapiens 0 627
ENST00000483991 CAMSAP1-008 processed_transcript Homo_sapiens 0 2610
ENST00000487868 CAMSAP1-004 retained_intron Homo_sapiens 0 265
ENST00000492174 CAMSAP1-007 processed_transcript Homo_sapiens 0 344
ENST00000515630 RP11-638O6.1-001 processed_pseudogene Homo_sapiens 0 451

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