C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114248 Cdk15-201 ENSMUSG00000026023 10090 + 1:59256907-59352369 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastKidneyLungMuscleOvaryPlacentaENSMUST00000114248
Transcript ID Adipose Adrenal Bladder Breast Kidney Lung Muscle Ovary Placenta
ENSMUST00000114248 0.113±0.07 0.040±0.02 0.695±0.00 0.210±0.02 0.035±0.02 0.042±0.01 0.049±0.01 0.203±0.04 0.085±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CR CIL_0009CR_0002 VISTA 1:59040862-59642046
CIL_0000JL CIL_0000JL_0003 CGP 1:59162926-59352993
CIL_0000JM CIL_0000JM_0003 CGP 1:59256906-59486955

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004693 IEA cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0006468 IEA protein phosphorylation
GO:0046872 IEA metal ion binding
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260967 CDK15-001 protein_coding Homo_sapiens 0 1517
ENST00000410091 CDK15-003 protein_coding Homo_sapiens 0 1517
ENST00000434439 CDK15-007 protein_coding Homo_sapiens 0 1517
ENST00000450471 CDK15-006 protein_coding Homo_sapiens 0 1541
ENST00000451080 CDK15-002 nonsense_mediated_decay Homo_sapiens 0 1201
ENST00000460149 CDK15-009 retained_intron Homo_sapiens 0 429
ENST00000466337 CDK15-010 retained_intron Homo_sapiens 0 305
ENST00000488419 CDK15-004 processed_transcript Homo_sapiens 0 647
ENST00000493754 CDK15-008 processed_transcript Homo_sapiens 0 276

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