C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076924-ENSDARG00000006093 CGP 7955 6:7865395-7979496
GeneTranscriptPositionBiotype
ENSDARG00000006093 (cdk15)
cyclin-dependent kinase 15 		ENSDART00000081129 (cdk15-001) 7934600-7979496 protein_coding
CIL_0000JL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000003393-ENSG00000138395 CGP 9606 2:201700554-201895550
GeneTranscriptPositionBiotype
ENSG00000003393 (ALS2)
amyotrophic lateral sclerosis 2 (juvenile) 		ENST00000264276 (ALS2-001) 201700554-201781189 protein_coding
ENST00000409632 (ALS2-009) 201761576-201780922 protein_coding
ENST00000410052 (ALS2-006) 201761675-201780951 protein_coding
ENST00000439495 (ALS2-005) 201701687-201744388 nonsense_mediated_decay
ENST00000462747 (ALS2-008) 201765383-201780911 processed_transcript
ENST00000467448 (ALS2-002) 201759457-201780956 protein_coding
ENST00000482789 (ALS2-003) 201741184-201780956 retained_intron
ENST00000482891 (ALS2-004) 201721990-201780956 retained_intron
ENST00000483703 (ALS2-010) 201728618-201738724 processed_transcript
ENST00000489440 (ALS2-012) 201716642-201726552 processed_transcript
ENST00000494017 (ALS2-011) 201726836-201733453 processed_transcript
ENST00000496244 (ALS2-007) 201761403-201780956 processed_transcript
ENSG00000138395 (CDK15)
cyclin-dependent kinase 15 		ENST00000260967 (CDK15-001) 201806375-201893544 protein_coding
ENST00000410091 (CDK15-003) 201790461-201893543 protein_coding
ENST00000434439 (CDK15-007) 201806621-201889457 protein_coding
ENST00000450471 (CDK15-006) 201806579-201895550 protein_coding
ENST00000451080 (CDK15-002) 201790461-201876583 nonsense_mediated_decay
ENST00000460149 (CDK15-009) 201854760-201893360 retained_intron
ENST00000466337 (CDK15-010) 201854790-201893383 retained_intron
ENST00000488419 (CDK15-004) 201806579-201861536 processed_transcript
ENST00000493754 (CDK15-008) 201790472-201807938 processed_transcript
ENSG00000221374 (AC007242.1)
 ENST00000408447 (AC007242.1-201) 201841129-201841230 miRNA
ENSG00000230799 (AC007279.2)
 ENST00000448547 (AC007279.2-001) 201762737-201763573 processed_pseudogene
ENSG00000231124 (UBE2V1P11)
ubiquitin-conjugating enzyme E2 variant 1 pseudogene 11 		ENST00000411559 (UBE2V1P11-001) 201824548-201824832 processed_pseudogene
CIL_0000JL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026024-ENSMUSG00000026023 CGP 10090 1:59162926-59352993
GeneTranscriptPositionBiotype
ENSMUSG00000026023 (Cdk15)
cyclin-dependent kinase 15 		ENSMUST00000114248 (Cdk15-201) 59256907-59352369 protein_coding
ENSMUST00000160662 (Cdk15-001) 59256906-59352993 protein_coding
ENSMUST00000162487 (Cdk15-003) 59257128-59257878 processed_transcript
ENSMUST00000162906 (Cdk15-002) 59298936-59352448 processed_transcript
ENSMUSG00000026024 (Als2)
amyotrophic lateral sclerosis 2 (juvenile) 		ENSMUST00000027178 (Als2-001) 59162926-59237231 protein_coding
ENSMUST00000159166 (Als2-003) 59191609-59237231 retained_intron
ENSMUST00000160945 (Als2-004) 59215651-59237226 protein_coding
ENSMUST00000163058 (Als2-002) 59164058-59237093 protein_coding
ENSMUST00000188469 (Als2-005) 59216344-59219126 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JL_0001ENSDARG00000006093ENSDART00000081129CIL_0000JL_0002ENSG00000003393ENST00000264276ENST00000409632ENST00000410052ENST00000439495ENST00000462747ENST00000467448ENST00000482789ENST00000482891ENST00000483703ENST00000489440ENST00000494017ENST00000496244ENSG00000138395ENST00000260967ENST00000410091ENST00000434439ENST00000450471ENST00000451080ENST00000460149ENST00000466337ENST00000488419ENST00000493754ENSG00000221374ENST00000408447ENSG00000230799ENST00000448547ENSG00000231124ENST00000411559CIL_0000JL_0003ENSMUSG00000026023ENSMUST00000114248ENSMUST00000160662ENSMUST00000162487ENSMUST00000162906ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166ENSMUST00000160945ENSMUST00000163058ENSMUST00000188469
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JL_0001ENSDARG00000006093ENSDART00000081129CIL_0000JL_0002ENSG00000003393ENST00000264276ENST00000439495ENST00000467448ENST00000482789ENST00000482891ENSG00000138395ENST00000260967ENST00000434439ENST00000450471ENST00000451080ENST00000466337ENST00000488419ENST00000493754ENSG00000221374ENST00000408447ENSG00000230799ENST00000448547ENSG00000231124ENST00000411559CIL_0000JL_0003ENSMUSG00000026023ENSMUST00000114248ENSMUST00000160662ENSMUST00000162906ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006093 ENSDART00000081129 N/A N/A N/A 7.521±0.00 N/A N/A 0.815±0.51 0.758±0.47 0.157±0.00 N/A 1.012±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003393 ENST00000264276 1.857±0.00 0.545±0.00 0.917±0.00 3.571±0.55 1.391±0.00 1.535±0.36 3.869±1.81 2.477±0.00 1.423±1.00 1.536±0.09 1.231±0.88 1.849±0.75 1.329±0.35 2.670±0.62
ENST00000409632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439495 N/A N/A N/A N/A 1.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467448 1.300±0.00 1.710±0.00 0.887±0.00 2.316±0.00 1.135±0.16 1.405±0.00 N/A N/A 1.765±0.29 1.356±0.00 N/A 1.057±0.08 0.953±0.29 1.952±0.61
ENST00000482789 N/A N/A N/A N/A 1.132±0.00 N/A 1.355±0.00 N/A N/A 1.522±0.00 N/A N/A N/A N/A
ENST00000482891 N/A N/A N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A N/A 1.102±0.00 N/A N/A
ENST00000483703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138395 ENST00000260967 N/A N/A N/A 0.014±0.00 0.127±0.00 N/A 0.052±0.00 N/A N/A 0.166±0.00 0.013±0.00 N/A N/A 0.497±0.00
ENST00000410091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434439 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A
ENST00000450471 N/A N/A 0.079±0.00 0.015±0.00 0.137±0.04 0.088±0.00 0.061±0.00 N/A 0.085±0.00 0.173±0.07 0.061±0.00 0.273±0.17 N/A 0.765±0.00
ENST00000451080 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A
ENST00000460149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466337 N/A N/A N/A N/A N/A N/A N/A N/A 1.491±0.00 N/A N/A N/A N/A N/A
ENST00000488419 N/A N/A N/A N/A N/A N/A 0.030±0.00 0.055±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A
ENSG00000221374 ENST00000408447 N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230799 ENST00000448547 N/A 0.305±0.00 0.227±0.00 N/A 0.056±0.00 0.350±0.00 N/A 0.685±0.00 0.237±0.00 0.592±0.00 N/A 0.311±0.34 0.104±0.00 0.153±0.13
ENSG00000231124 ENST00000411559 N/A N/A N/A 0.080±0.00 N/A 0.256±0.00 0.038±0.00 N/A N/A N/A N/A N/A N/A 0.073±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026023 ENSMUST00000114248 0.113±0.07 0.040±0.02 0.695±0.00 N/A 0.210±0.02 N/A N/A 0.035±0.02 N/A 0.042±0.01 0.049±0.01 0.203±0.04 0.085±0.01 N/A
ENSMUST00000160662 0.173±0.09 0.084±0.07 N/A 0.403±0.40 0.297±0.05 0.117±0.05 0.028±0.01 0.066±0.03 0.039±0.02 0.077±0.03 0.039±0.02 0.523±0.24 0.270±0.14 1.447±1.25
ENSMUST00000162487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.01 N/A N/A N/A
ENSMUSG00000026024 ENSMUST00000027178 4.366±0.61 1.672±0.32 3.908±0.14 8.591±1.01 3.081±0.49 1.151±0.43 1.720±0.14 6.271±0.68 9.761±4.92 3.430±0.13 4.668±0.30 3.301±1.29 10.736±3.12 3.370±0.64
ENSMUST00000159166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.350±0.00 N/A N/A
ENSMUST00000160945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading