C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076924-ENSDARG00000006093 CGP 7955 6:7865395-7979496
GeneTranscriptPositionBiotype
ENSDARG00000006093 (cdk15)
cyclin-dependent kinase 15 		ENSDART00000081129 (cdk15-001) 7934600-7979496 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000JL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000003393-ENSG00000138395 CGP 9606 2:201700554-201895550
GeneTranscriptPositionBiotype
ENSG00000003393 (ALS2)
amyotrophic lateral sclerosis 2 (juvenile) 		ENST00000264276 (ALS2-001) 201700554-201781189 protein_coding
ENST00000409632 (ALS2-009) 201761576-201780922 protein_coding
ENST00000410052 (ALS2-006) 201761675-201780951 protein_coding
ENST00000439495 (ALS2-005) 201701687-201744388 nonsense_mediated_decay
ENST00000462747 (ALS2-008) 201765383-201780911 processed_transcript
ENST00000467448 (ALS2-002) 201759457-201780956 protein_coding
ENST00000482789 (ALS2-003) 201741184-201780956 retained_intron
ENST00000482891 (ALS2-004) 201721990-201780956 retained_intron
ENST00000483703 (ALS2-010) 201728618-201738724 processed_transcript
ENST00000489440 (ALS2-012) 201716642-201726552 processed_transcript
ENST00000494017 (ALS2-011) 201726836-201733453 processed_transcript
ENST00000496244 (ALS2-007) 201761403-201780956 processed_transcript
ENSG00000138395 (CDK15)
cyclin-dependent kinase 15 		ENST00000260967 (CDK15-001) 201806375-201893544 protein_coding
ENST00000410091 (CDK15-003) 201790461-201893543 protein_coding
ENST00000434439 (CDK15-007) 201806621-201889457 protein_coding
ENST00000450471 (CDK15-006) 201806579-201895550 protein_coding
ENST00000451080 (CDK15-002) 201790461-201876583 nonsense_mediated_decay
ENST00000460149 (CDK15-009) 201854760-201893360 retained_intron
ENST00000466337 (CDK15-010) 201854790-201893383 retained_intron
ENST00000488419 (CDK15-004) 201806579-201861536 processed_transcript
ENST00000493754 (CDK15-008) 201790472-201807938 processed_transcript
ENSG00000221374 (AC007242.1)
 ENST00000408447 (AC007242.1-201) 201841129-201841230 miRNA
ENSG00000230799 (AC007279.2)
 ENST00000448547 (AC007279.2-001) 201762737-201763573 processed_pseudogene
ENSG00000231124 (UBE2V1P11)
ubiquitin-conjugating enzyme E2 variant 1 pseudogene 11 		ENST00000411559 (UBE2V1P11-001) 201824548-201824832 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000JL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026024-ENSMUSG00000026023 CGP 10090 1:59162926-59352993
GeneTranscriptPositionBiotype
ENSMUSG00000026023 (Cdk15)
cyclin-dependent kinase 15 		ENSMUST00000114248 (Cdk15-201) 59256907-59352369 protein_coding
ENSMUST00000160662 (Cdk15-001) 59256906-59352993 protein_coding
ENSMUST00000162487 (Cdk15-003) 59257128-59257878 processed_transcript
ENSMUST00000162906 (Cdk15-002) 59298936-59352448 processed_transcript
ENSMUSG00000026024 (Als2)
amyotrophic lateral sclerosis 2 (juvenile) 		ENSMUST00000027178 (Als2-001) 59162926-59237231 protein_coding
ENSMUST00000159166 (Als2-003) 59191609-59237231 retained_intron
ENSMUST00000160945 (Als2-004) 59215651-59237226 protein_coding
ENSMUST00000163058 (Als2-002) 59164058-59237093 protein_coding
ENSMUST00000188469 (Als2-005) 59216344-59219126 retained_intron

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JL_0001ENSDARG00000006093ENSDART00000081129CIL_0000JL_0002ENSG00000003393ENST00000264276ENST00000409632ENST00000410052ENST00000439495ENST00000462747ENST00000467448ENST00000482789ENST00000482891ENST00000483703ENST00000489440ENST00000494017ENST00000496244ENSG00000138395ENST00000260967ENST00000410091ENST00000434439ENST00000450471ENST00000451080ENST00000460149ENST00000466337ENST00000488419ENST00000493754ENSG00000221374ENST00000408447ENSG00000230799ENST00000448547ENSG00000231124ENST00000411559CIL_0000JL_0003ENSMUSG00000026023ENSMUST00000114248ENSMUST00000160662ENSMUST00000162487ENSMUST00000162906ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166ENSMUST00000160945ENSMUST00000163058ENSMUST00000188469
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JL_0001ENSDARG00000006093ENSDART00000081129CIL_0000JL_0002ENSG00000003393ENST00000264276ENST00000439495ENST00000467448ENST00000482789ENST00000482891ENSG00000138395ENST00000260967ENST00000434439ENST00000450471ENST00000451080ENST00000466337ENST00000488419ENST00000493754ENSG00000221374ENST00000408447ENSG00000230799ENST00000448547ENSG00000231124ENST00000411559CIL_0000JL_0003ENSMUSG00000026023ENSMUST00000114248ENSMUST00000160662ENSMUST00000162906ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006093 ENSDART00000081129 N/A N/A N/A 7.521±0.00 N/A N/A 0.815±0.51 0.758±0.47 0.157±0.00 N/A 1.012±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003393 ENST00000264276 1.857±0.00 0.545±0.00 0.917±0.00 3.571±0.55 1.391±0.00 1.535±0.36 3.869±1.81 2.477±0.00 1.423±1.00 1.536±0.09 1.231±0.88 1.849±0.75 1.329±0.35 2.670±0.62
ENST00000409632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439495 N/A N/A N/A N/A 1.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467448 1.300±0.00 1.710±0.00 0.887±0.00 2.316±0.00 1.135±0.16 1.405±0.00 N/A N/A 1.765±0.29 1.356±0.00 N/A 1.057±0.08 0.953±0.29 1.952±0.61
ENST00000482789 N/A N/A N/A N/A 1.132±0.00 N/A 1.355±0.00 N/A N/A 1.522±0.00 N/A N/A N/A N/A
ENST00000482891 N/A N/A N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A N/A 1.102±0.00 N/A N/A
ENST00000483703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138395 ENST00000260967 N/A N/A N/A 0.014±0.00 0.127±0.00 N/A 0.052±0.00 N/A N/A 0.166±0.00 0.013±0.00 N/A N/A 0.497±0.00
ENST00000410091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434439 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A
ENST00000450471 N/A N/A 0.079±0.00 0.015±0.00 0.137±0.04 0.088±0.00 0.061±0.00 N/A 0.085±0.00 0.173±0.07 0.061±0.00 0.273±0.17 N/A 0.765±0.00
ENST00000451080 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A
ENST00000460149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466337 N/A N/A N/A N/A N/A N/A N/A N/A 1.491±0.00 N/A N/A N/A N/A N/A
ENST00000488419 N/A N/A N/A N/A N/A N/A 0.030±0.00 0.055±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A
ENSG00000221374 ENST00000408447 N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230799 ENST00000448547 N/A 0.305±0.00 0.227±0.00 N/A 0.056±0.00 0.350±0.00 N/A 0.685±0.00 0.237±0.00 0.592±0.00 N/A 0.311±0.34 0.104±0.00 0.153±0.13
ENSG00000231124 ENST00000411559 N/A N/A N/A 0.080±0.00 N/A 0.256±0.00 0.038±0.00 N/A N/A N/A N/A N/A N/A 0.073±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026023 ENSMUST00000114248 0.113±0.07 0.040±0.02 0.695±0.00 N/A 0.210±0.02 N/A N/A 0.035±0.02 N/A 0.042±0.01 0.049±0.01 0.203±0.04 0.085±0.01 N/A
ENSMUST00000160662 0.173±0.09 0.084±0.07 N/A 0.403±0.40 0.297±0.05 0.117±0.05 0.028±0.01 0.066±0.03 0.039±0.02 0.077±0.03 0.039±0.02 0.523±0.24 0.270±0.14 1.447±1.25
ENSMUST00000162487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.01 N/A N/A N/A
ENSMUSG00000026024 ENSMUST00000027178 4.366±0.61 1.672±0.32 3.908±0.14 8.591±1.01 3.081±0.49 1.151±0.43 1.720±0.14 6.271±0.68 9.761±4.92 3.430±0.13 4.668±0.30 3.301±1.29 10.736±3.12 3.370±0.64
ENSMUST00000159166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.350±0.00 N/A N/A
ENSMUST00000160945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading