C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006093-ENSDARG00000027589 CGP 7955 6:7934600-8022883
GeneTranscriptPositionBiotype
ENSDARG00000006093 (cdk15)
cyclin-dependent kinase 15 		ENSDART00000081129 (cdk15-001) 7934600-7979496 protein_coding
ENSDARG00000027589 (fzd7b)
frizzled homolog 7b 		ENSDART00000039280 (fzd7b-001) 8019005-8022883 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000JM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138395-ENSG00000155760 CGP 9606 2:201790461-202038445
GeneTranscriptPositionBiotype
ENSG00000138395 (CDK15)
cyclin-dependent kinase 15 		ENST00000260967 (CDK15-001) 201806375-201893544 protein_coding
ENST00000410091 (CDK15-003) 201790461-201893543 protein_coding
ENST00000434439 (CDK15-007) 201806621-201889457 protein_coding
ENST00000450471 (CDK15-006) 201806579-201895550 protein_coding
ENST00000451080 (CDK15-002) 201790461-201876583 nonsense_mediated_decay
ENST00000460149 (CDK15-009) 201854760-201893360 retained_intron
ENST00000466337 (CDK15-010) 201854790-201893383 retained_intron
ENST00000488419 (CDK15-004) 201806579-201861536 processed_transcript
ENST00000493754 (CDK15-008) 201790472-201807938 processed_transcript
ENSG00000155760 (FZD7)
frizzled class receptor 7 		ENST00000286201 (FZD7-001) 202034587-202038445 protein_coding
ENSG00000221374 (AC007242.1)
 ENST00000408447 (AC007242.1-201) 201841129-201841230 miRNA
ENSG00000231124 (UBE2V1P11)
ubiquitin-conjugating enzyme E2 variant 1 pseudogene 11 		ENST00000411559 (UBE2V1P11-001) 201824548-201824832 processed_pseudogene
ENSG00000273209 (RP11-107N15.1)
 ENST00000608741 (RP11-107N15.1-001) 202032770-202033537 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000JM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026023-ENSMUSG00000041075 CGP 10090 1:59256906-59486955
GeneTranscriptPositionBiotype
ENSMUSG00000026023 (Cdk15)
cyclin-dependent kinase 15 		ENSMUST00000114248 (Cdk15-201) 59256907-59352369 protein_coding
ENSMUST00000160662 (Cdk15-001) 59256906-59352993 protein_coding
ENSMUST00000162487 (Cdk15-003) 59257128-59257878 processed_transcript
ENSMUST00000162906 (Cdk15-002) 59298936-59352448 processed_transcript
ENSMUSG00000041075 (Fzd7)
frizzled homolog 7 (Drosophila) 		ENSMUST00000114246 (Fzd7-001) 59482424-59486955 protein_coding
ENSMUSG00000099922 (RP24-149E13.1)
predicted gene 29016 		ENSMUST00000187523 (RP24-149E13.1-001) 59378930-59392299 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JM_0001ENSDARG00000006093ENSDART00000081129ENSDARG00000027589ENSDART00000039280CIL_0000JM_0002ENSG00000138395ENST00000260967ENST00000410091ENST00000434439ENST00000450471ENST00000451080ENST00000460149ENST00000466337ENST00000488419ENST00000493754ENSG00000155760ENST00000286201ENSG00000221374ENST00000408447ENSG00000231124ENST00000411559ENSG00000273209ENST00000608741CIL_0000JM_0003ENSMUSG00000026023ENSMUST00000114248ENSMUST00000160662ENSMUST00000162487ENSMUST00000162906ENSMUSG00000041075ENSMUST00000114246ENSMUSG00000099922ENSMUST00000187523
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JM_0001ENSDARG00000006093ENSDART00000081129ENSDARG00000027589ENSDART00000039280CIL_0000JM_0002ENSG00000138395ENST00000260967ENST00000434439ENST00000450471ENST00000451080ENST00000466337ENST00000488419ENST00000493754ENSG00000155760ENST00000286201ENSG00000221374ENST00000408447ENSG00000231124ENST00000411559ENSG00000273209ENST00000608741CIL_0000JM_0003ENSMUSG00000026023ENSMUST00000114248ENSMUST00000160662ENSMUST00000162906ENSMUSG00000041075ENSMUST00000114246ENSMUSG00000099922ENSMUST00000187523
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006093 ENSDART00000081129 N/A N/A N/A 7.521±0.00 N/A N/A 0.815±0.51 0.758±0.47 0.157±0.00 N/A 1.012±0.00 N/A N/A N/A
ENSDARG00000027589 ENSDART00000039280 N/A N/A N/A 0.992±0.28 N/A N/A 6.701±2.05 8.570±0.79 2.140±0.00 N/A 1.897±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138395 ENST00000260967 N/A N/A N/A 0.014±0.00 0.127±0.00 N/A 0.052±0.00 N/A N/A 0.166±0.00 0.013±0.00 N/A N/A 0.497±0.00
ENST00000410091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434439 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A
ENST00000450471 N/A N/A 0.079±0.00 0.015±0.00 0.137±0.04 0.088±0.00 0.061±0.00 N/A 0.085±0.00 0.173±0.07 0.061±0.00 0.273±0.17 N/A 0.765±0.00
ENST00000451080 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A
ENST00000460149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466337 N/A N/A N/A N/A N/A N/A N/A N/A 1.491±0.00 N/A N/A N/A N/A N/A
ENST00000488419 N/A N/A N/A N/A N/A N/A 0.030±0.00 0.055±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A
ENSG00000155760 ENST00000286201 3.957±0.00 6.043±0.00 0.970±0.00 1.069±0.58 8.320±5.59 10.977±9.19 2.967±2.10 4.139±4.09 4.731±4.47 1.920±0.92 3.692±1.26 11.509±8.95 6.255±0.89 5.435±2.74
ENSG00000221374 ENST00000408447 N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231124 ENST00000411559 N/A N/A N/A 0.080±0.00 N/A 0.256±0.00 0.038±0.00 N/A N/A N/A N/A N/A N/A 0.073±0.00
ENSG00000273209 ENST00000608741 0.165±0.00 0.087±0.00 N/A 0.271±0.00 0.048±0.00 0.304±0.00 N/A 0.099±0.00 0.094±0.00 0.844±0.00 0.246±0.00 0.704±0.50 0.154±0.00 0.341±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026023 ENSMUST00000114248 0.113±0.07 0.040±0.02 0.695±0.00 N/A 0.210±0.02 N/A N/A 0.035±0.02 N/A 0.042±0.01 0.049±0.01 0.203±0.04 0.085±0.01 N/A
ENSMUST00000160662 0.173±0.09 0.084±0.07 N/A 0.403±0.40 0.297±0.05 0.117±0.05 0.028±0.01 0.066±0.03 0.039±0.02 0.077±0.03 0.039±0.02 0.523±0.24 0.270±0.14 1.447±1.25
ENSMUST00000162487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.01 N/A N/A N/A
ENSMUSG00000041075 ENSMUST00000114246 9.579±5.81 7.675±1.77 17.379±0.05 2.175±0.90 13.453±4.71 9.270±0.77 2.427±0.42 4.290±1.03 3.478±1.92 20.606±1.34 11.448±3.79 13.440±4.86 3.279±2.03 0.686±0.28
ENSMUSG00000099922 ENSMUST00000187523 N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A 0.055±0.03 0.055±0.00 N/A 0.166±0.09 0.018±0.02 0.023±0.00

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