C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chimerin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114401 Chn2-005 ENSMUSG00000004633 10090 + 6:54269156-54300391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000114401
Transcript ID Testis
ENSMUST00000114401 48.241±2.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZN CIL_0003ZN_0002 CGP 6:53873379-54301810
CIL_0003ZM CIL_0003ZM_0002 CGP 6:54039554-54330200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0016020 IEA membrane
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222792 CHN2-001 protein_coding Homo_sapiens 0 1179
ENST00000409041 CHN2-201 protein_coding Homo_sapiens 0 470
ENST00000410098 CHN2-004 processed_transcript Homo_sapiens 0 1044
ENST00000412711 CHN2-002 retained_intron Homo_sapiens 0 1177
ENST00000421775 CHN2-202 protein_coding Homo_sapiens 0 684
ENST00000424025 CHN2-203 protein_coding Homo_sapiens 0 414
ENST00000433720 CHN2-005 protein_coding Homo_sapiens 0 375
ENST00000435288 CHN2-204 protein_coding Homo_sapiens 0 311
ENST00000439711 CHN2-205 protein_coding Homo_sapiens 0 575
ENST00000446446 CHN2-018 protein_coding Homo_sapiens 0 569
ENST00000467441 CHN2-007 processed_transcript Homo_sapiens 0 569
ENST00000474070 CHN2-017 nonsense_mediated_decay Homo_sapiens 6e-24 115
ENST00000493906 CHN2-006 processed_transcript Homo_sapiens 0 571
ENST00000495789 CHN2-206 protein_coding Homo_sapiens 3e-17 94
ENST00000539389 CHN2-207 protein_coding Homo_sapiens 0 387
ENST00000539406 CHN2-208 protein_coding Homo_sapiens 0 289

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