C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114438 Pdzd4-002 ENSMUSG00000002006 10090 - X:73793359-73824969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverLungMuscleOvaryPlacentaENSMUST00000114438
Transcript ID Brain Breast Liver Lung Muscle Ovary Placenta
ENSMUST00000114438 27.618±0.00 0.416±0.00 0.222±0.15 0.294±0.00 0.168±0.08 1.255±0.00 0.176±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UT CIL_0001UT_0002 CGP X:73787028-73824969
CIL_0001US CIL_0001US_0002 CGP X:73793359-73896105

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000164640 PDZD4-002 protein_coding Homo_sapiens 0 1965
ENST00000393758 PDZD4-201 protein_coding Homo_sapiens 0 1965
ENST00000475140 PDZD4-003 processed_transcript Homo_sapiens 0 425
ENST00000480418 PDZD4-001 processed_transcript Homo_sapiens 0 549
ENST00000480650 PDZD4-006 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000483693 PDZD4-004 processed_transcript Homo_sapiens 0 268
ENST00000484792 PDZD4-005 processed_transcript Homo_sapiens 0 425
ENST00000544474 PDZD4-202 protein_coding Homo_sapiens 0 2261

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