C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180879-ENSG00000067840 CGP 9606 X:153793516-153830565
GeneTranscriptPositionBiotype
ENSG00000067829 (IDH3G)
isocitrate dehydrogenase 3 (NAD+) gamma 		ENST00000217901 (IDH3G-005) 153785766-153794523 protein_coding
ENST00000370092 (IDH3G-014) 153785766-153794512 protein_coding
ENST00000370093 (IDH3G-008) 153785767-153794381 protein_coding
ENST00000427365 (IDH3G-007) 153785798-153794356 protein_coding
ENST00000444338 (IDH3G-010) 153787051-153789790 protein_coding
ENST00000444450 (IDH3G-003) 153786801-153794359 protein_coding
ENST00000454076 (IDH3G-006) 153785767-153787553 protein_coding
ENST00000461215 (IDH3G-001) 153787826-153794346 processed_transcript
ENST00000491235 (IDH3G-004) 153789838-153794325 processed_transcript
ENST00000495356 (IDH3G-012) 153787391-153794335 processed_transcript
ENST00000497043 (IDH3G-002) 153787127-153794356 processed_transcript
ENST00000619865 (IDH3G-201) 153785767-153794523 protein_coding
ENSG00000067840 (PDZD4)
PDZ domain containing 4 		ENST00000164640 (PDZD4-002) 153802166-153830490 protein_coding
ENST00000393758 (PDZD4-201) 153802168-153830548 protein_coding
ENST00000468491 (PDZD4-007) 153807327-153829670 processed_transcript
ENST00000475140 (PDZD4-003) 153805093-153829856 processed_transcript
ENST00000480418 (PDZD4-001) 153805582-153830565 processed_transcript
ENST00000480650 (PDZD4-006) 153806071-153830364 nonsense_mediated_decay
ENST00000483693 (PDZD4-004) 153805545-153830143 processed_transcript
ENST00000484792 (PDZD4-005) 153804879-153808139 processed_transcript
ENST00000544474 (PDZD4-202) 153802168-153830548 protein_coding
CIL_0001UT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002014-ENSMUSG00000002006 CGP 10090 X:73787028-73824969
GeneTranscriptPositionBiotype
ENSMUSG00000002006 (Pdzd4)
PDZ domain containing 4 		ENSMUST00000002080 (Pdzd4-001) 73793359-73824969 protein_coding
ENSMUST00000114438 (Pdzd4-002) 73793359-73824969 protein_coding
ENSMUSG00000002014 (Ssr4)
signal sequence receptor, delta 		ENSMUST00000002090 (Ssr4-001) 73787062-73790826 protein_coding
ENSMUST00000129239 (Ssr4-007) 73788844-73790830 retained_intron
ENSMUST00000130738 (Ssr4-002) 73787224-73790811 retained_intron
ENSMUST00000136544 (Ssr4-004) 73787182-73789092 retained_intron
ENSMUST00000141721 (Ssr4-003) 73787184-73790826 retained_intron
ENSMUST00000142829 (Ssr4-006) 73787265-73790163 retained_intron
ENSMUST00000155552 (Ssr4-005) 73787184-73790332 retained_intron
ENSMUST00000166518 (Ssr4-201) 73787028-73790824 protein_coding
ENSMUSG00000085669 (Gm14817)
predicted gene 14817 		ENSMUST00000148522 (Gm14817-001) 73795215-73797616 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UT_0001ENSG00000067829ENST00000217901ENST00000370092ENST00000370093ENST00000427365ENST00000444338ENST00000444450ENST00000454076ENST00000461215ENST00000491235ENST00000495356ENST00000497043ENST00000619865ENSG00000067840ENST00000164640ENST00000393758ENST00000468491ENST00000475140ENST00000480418ENST00000480650ENST00000483693ENST00000484792ENST00000544474CIL_0001UT_0002ENSMUSG00000002006ENSMUST00000002080ENSMUST00000114438ENSMUSG00000002014ENSMUST00000002090ENSMUST00000129239ENSMUST00000130738ENSMUST00000136544ENSMUST00000141721ENSMUST00000142829ENSMUST00000155552ENSMUST00000166518ENSMUSG00000085669ENSMUST00000148522
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UT_0001ENSG00000067829ENST00000217901ENST00000444338ENST00000444450ENST00000454076ENST00000619865ENSG00000067840ENST00000164640ENST00000393758ENST00000468491ENST00000475140ENST00000480418ENST00000484792ENST00000544474CIL_0001UT_0002ENSMUSG00000002006ENSMUST00000002080ENSMUST00000114438ENSMUSG00000002014ENSMUST00000002090ENSMUST00000129239ENSMUST00000130738ENSMUST00000136544ENSMUST00000141721ENSMUST00000142829ENSMUST00000166518ENSMUSG00000085669ENSMUST00000148522
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067829 ENST00000217901 29.550±0.00 N/A N/A 14.769±6.39 21.251±0.00 22.526±0.00 30.552±0.00 40.583±0.00 N/A 37.488±0.00 32.616±26.83 32.722±11.11 29.537±14.12 23.704±17.25
ENST00000370092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.696±0.00 N/A N/A
ENST00000444450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.506±0.00 7.371±0.00
ENST00000454076 N/A N/A N/A N/A N/A N/A N/A 2.587±0.00 N/A N/A 8.560±0.00 N/A N/A N/A
ENST00000461215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619865 N/A N/A 2.467±0.00 N/A N/A 3.088±0.00 2.683±0.00 N/A N/A N/A N/A N/A 6.972±0.00 7.846±0.00
ENSG00000067840 ENST00000164640 N/A 2.708±0.00 N/A 11.487±8.16 0.951±0.65 4.095±0.00 0.741±0.00 N/A N/A N/A N/A 0.644±0.63 0.676±0.00 4.493±0.00
ENST00000393758 0.963±0.00 N/A N/A N/A N/A 1.218±0.00 N/A N/A N/A 1.199±0.00 N/A 0.792±0.49 N/A N/A
ENST00000468491 N/A N/A N/A N/A 1.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475140 N/A N/A N/A N/A N/A N/A N/A N/A 1.739±0.00 N/A N/A N/A 0.378±0.00 N/A
ENST00000480418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.067±0.00 N/A N/A N/A
ENST00000480650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484792 N/A N/A N/A N/A 0.376±0.00 N/A N/A N/A N/A 0.747±0.00 N/A N/A 0.380±0.00 3.499±0.00
ENST00000544474 0.792±0.00 N/A N/A 34.522±24.34 N/A 3.004±0.00 N/A 0.125±0.00 0.578±0.00 2.293±0.00 0.271±0.07 0.616±0.50 0.413±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002006 ENSMUST00000002080 2.142±1.81 1.297±0.12 4.633±0.07 26.674±13.18 0.804±0.06 0.921±0.29 0.393±0.21 0.275±0.10 0.223±0.10 1.307±0.28 0.207±0.10 2.810±0.99 0.701±0.09 0.249±0.09
ENSMUST00000114438 N/A N/A N/A 27.618±0.00 0.416±0.00 N/A N/A N/A 0.222±0.15 0.294±0.00 0.168±0.08 1.255±0.00 0.176±0.12 N/A
ENSMUSG00000002014 ENSMUST00000002090 23.297±3.47 44.050±4.63 29.974±6.96 10.038±4.72 23.932±2.94 44.797±7.58 11.055±2.43 28.898±1.63 50.069±10.16 23.415±3.99 12.628±1.89 28.274±4.60 64.778±16.24 3.288±1.63
ENSMUST00000129239 N/A N/A N/A 8.559±6.38 N/A N/A N/A N/A N/A N/A N/A 10.650±4.75 N/A N/A
ENSMUST00000130738 N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136544 N/A N/A N/A 18.158±0.00 N/A N/A N/A N/A N/A N/A N/A 54.822±6.33 120.814±31.09 4.386±0.00
ENSMUST00000141721 5.631±0.26 N/A 4.476±1.15 4.132±1.10 4.371±0.53 N/A 1.744±0.17 N/A 6.025±1.36 3.277±0.09 N/A 6.527±2.01 4.741±0.00 0.885±0.02
ENSMUST00000142829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.934±0.00
ENSMUST00000155552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166518 72.778±3.52 111.164±5.42 63.918±12.66 30.715±8.05 68.284±15.60 111.269±9.44 34.850±4.75 90.390±7.87 92.535±16.71 54.468±22.11 31.338±3.51 74.662±12.92 100.573±11.93 16.393±8.41
ENSMUSG00000085669 ENSMUST00000148522 2.498±1.90 N/A N/A N/A 2.734±0.00 1.804±0.00 0.814±0.06 0.783±0.09 0.373±0.12 1.401±0.10 0.452±0.00 4.377±0.59 0.524±0.13 N/A

Loading