C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544474 PDZD4-202 ENSG00000067840 9606 - X:153802168-153830548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungMuscleOvaryPlacentaENST00000544474
Transcript ID Adipose Brain Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000544474 0.792±0.00 34.522±24.34 3.004±0.00 0.125±0.00 0.578±0.00 2.293±0.00 0.271±0.07 0.616±0.50 0.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UT CIL_0001UT_0001 CGP X:153793516-153830565
CIL_0001US CIL_0001US_0001 CGP X:153802166-153909223

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114438 Pdzd4-002 protein_coding Mus_musculus 0 2261
ENSMUST00000002080 Pdzd4-001 protein_coding Mus_musculus 0 1965

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