C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 26, member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114764 Slc26a8-002 ENSMUSG00000036196 10090 - 17:28637783-28689987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114764
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114764 0.153±0.06 0.360±0.08 0.465±0.00 0.340±0.14 0.386±0.17 0.121±0.04 0.078±0.01 0.141±0.04 0.075±0.08 0.128±0.04 0.043±0.01 0.396±0.17 0.314±0.28 48.084±17.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002O7 CIL_0002O7_0002 CGP 17:28587648-28689987
CIL_0002O8 CIL_0002O8_0002 CGP 17:28637783-28748404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006820 IEA anion transport
GO:0006821 IEA chloride transport
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0015301 IEA anion:anion antiporter activity
GO:0016021 IEA integral component of membrane
GO:0019531 IEA oxalate transmembrane transporter activity
GO:0019532 IEA oxalate transport
GO:0030154 IEA cell differentiation
GO:0051321 IEA meiotic cell cycle
GO:1902358 IEA sulfate transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217957 VSIG1-001 protein_coding Homo_sapiens 0.00000009 64
ENST00000355574 SLC26A8-005 protein_coding Homo_sapiens 0 1526
ENST00000394602 SLC26A8-006 protein_coding Homo_sapiens 0 857
ENST00000415430 VSIG1-201 protein_coding Homo_sapiens 0.0000001 64
ENST00000466805 SLC26A8-003 retained_intron Homo_sapiens 0 595
ENST00000486155 SLC26A8-004 retained_intron Homo_sapiens 0 1158
ENST00000490799 SLC26A8-001 protein_coding Homo_sapiens 0 1528

Loading