C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002O7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000096063-ENSG00000112053 CGP 9606 6:35832966-36024868
GeneTranscriptPositionBiotype
ENSG00000112053 (SLC26A8)
solute carrier family 26 (anion exchanger), member 8 		ENST00000355574 (SLC26A8-005) 35943521-36024588 protein_coding
ENST00000394602 (SLC26A8-006) 35943520-36024493 protein_coding
ENST00000465492 (SLC26A8-002) 35943695-35968895 nonsense_mediated_decay
ENST00000466805 (SLC26A8-003) 35943518-35969822 retained_intron
ENST00000469847 (SLC26A8-008) 35997838-36024780 nonsense_mediated_decay
ENST00000480663 (SLC26A8-007) 36012249-36024868 protein_coding
ENST00000486155 (SLC26A8-004) 35959927-36024856 retained_intron
ENST00000490799 (SLC26A8-001) 35943514-36024855 protein_coding
ENSG00000271304 (DPRXP2)
divergent-paired related homeobox pseudogene 2 		ENST00000605269 (DPRXP2-001) 35989515-35990436 processed_pseudogene
CIL_0002O7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004865-ENSMUSG00000036196 CGP 10090 17:28587648-28689987
GeneTranscriptPositionBiotype
ENSMUSG00000004865 (Srpk1)
serine/arginine-rich protein specific kinase 1 		ENSMUST00000004987 (Srpk1-002) 28589591-28607169 nonsense_mediated_decay
ENSMUST00000114767 (Srpk1-005) 28620143-28622472 protein_coding
ENSMUST00000126683 (Srpk1-004) 28595463-28600886 retained_intron
ENSMUST00000130643 (Srpk1-001) 28587648-28622521 protein_coding
ENSMUST00000136504 (Srpk1-007) 28589989-28592425 retained_intron
ENSMUST00000145023 (Srpk1-003) 28602548-28622451 retained_intron
ENSMUST00000145730 (Srpk1-006) 28600336-28601263 retained_intron
ENSMUSG00000036196 (Slc26a8)
solute carrier family 26, member 8 		ENSMUST00000114764 (Slc26a8-002) 28637783-28689987 protein_coding
ENSMUST00000145224 (Slc26a8-001) 28649657-28689987 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002O7_0001ENSG00000112053ENST00000355574ENST00000394602ENST00000465492ENST00000466805ENST00000469847ENST00000480663ENST00000486155ENST00000490799ENSG00000271304ENST00000605269CIL_0002O7_0002ENSMUSG00000004865ENSMUST00000004987ENSMUST00000114767ENSMUST00000126683ENSMUST00000130643ENSMUST00000136504ENSMUST00000145023ENSMUST00000145730ENSMUSG00000036196ENSMUST00000114764ENSMUST00000145224
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002O7_0001ENSG00000112053ENST00000355574ENST00000394602ENST00000465492ENST00000466805ENST00000469847ENST00000480663ENST00000486155ENST00000490799ENSG00000271304ENST00000605269CIL_0002O7_0002ENSMUSG00000004865ENSMUST00000004987ENSMUST00000126683ENSMUST00000130643ENSMUST00000145023ENSMUST00000145730ENSMUSG00000036196ENSMUST00000114764ENSMUST00000145224
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112053 ENST00000355574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 0.111±0.00 33.393±17.52
ENST00000394602 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A 0.062±0.00 N/A
ENST00000465492 N/A N/A N/A N/A 0.060±0.01 0.019±0.00 N/A N/A N/A 0.224±0.00 N/A 0.112±0.08 0.159±0.11 5.936±0.00
ENST00000466805 0.106±0.00 0.156±0.00 N/A 0.254±0.07 0.071±0.00 0.018±0.00 0.033±0.00 0.076±0.00 0.019±0.00 0.069±0.00 0.008±0.00 N/A 0.028±0.00 N/A
ENST00000469847 N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A
ENST00000480663 N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A 0.167±0.00 N/A
ENST00000486155 0.066±0.00 0.113±0.00 N/A 0.110±0.00 0.033±0.00 0.070±0.05 0.011±0.00 0.051±0.00 N/A 0.051±0.00 N/A 0.089±0.06 N/A N/A
ENST00000490799 N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A
ENSG00000271304 ENST00000605269 0.104±0.00 N/A N/A 0.148±0.00 0.021±0.00 0.176±0.08 N/A N/A N/A N/A N/A 0.174±0.00 N/A 0.172±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004865 ENSMUST00000004987 4.135±0.40 5.676±1.12 N/A 11.429±3.34 6.362±2.48 6.018±1.10 2.009±0.25 3.757±0.76 3.282±0.86 3.194±0.47 1.503±0.13 9.697±2.86 22.162±8.57 57.805±12.92
ENSMUST00000114767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126683 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.058±0.00 N/A N/A N/A N/A
ENSMUST00000130643 5.521±2.26 1.118±0.15 8.524±0.13 12.352±3.53 3.623±0.81 5.048±1.79 3.359±1.24 6.139±0.93 4.583±2.91 3.477±0.58 3.050±0.27 5.642±2.12 12.667±4.22 20.507±2.41
ENSMUST00000136504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.000±0.00 15.306±0.00 13.781±0.00 89.374±0.00
ENSMUST00000145730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 196.563±0.00
ENSMUSG00000036196 ENSMUST00000114764 0.153±0.06 0.360±0.08 0.465±0.00 0.340±0.14 0.386±0.17 0.121±0.04 0.078±0.01 0.141±0.04 0.075±0.08 0.128±0.04 0.043±0.01 0.396±0.17 0.314±0.28 48.084±17.51
ENSMUST00000145224 0.079±0.00 0.169±0.09 N/A 0.201±0.00 0.135±0.04 0.102±0.11 N/A 0.068±0.02 0.048±0.02 0.062±0.00 0.056±0.00 0.273±0.25 0.053±0.00 N/A

Loading