C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis specific 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114902 Tsga10-003 ENSMUSG00000060771 10090 - 1:37760823-37855374 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMuscleOvaryTestisENSMUST00000114902
Transcript ID Brain Colon Muscle Ovary Testis
ENSMUST00000114902 1.972±0.00 0.150±0.00 0.251±0.03 0.717±0.49 21.047±31.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034C CIL_00034C_0002 CGP 1:37611677-37865298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 ISA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0016020 IEA membrane
GO:0030031 IMP cell projection assembly
GO:0031514 IDA motile cilium
GO:0043005 IDA neuron projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355053 TSGA10-002 protein_coding Homo_sapiens 0 2630
ENST00000393482 TSGA10-003 protein_coding Homo_sapiens 0 2774
ENST00000393483 TSGA10-001 protein_coding Homo_sapiens 0 2630
ENST00000409564 TSGA10-005 protein_coding Homo_sapiens 0 2532
ENST00000410001 TSGA10-007 protein_coding Homo_sapiens 0 3061
ENST00000462782 TSGA10-012 retained_intron Homo_sapiens 0 259
ENST00000471174 TSGA10-010 processed_transcript Homo_sapiens 0 433
ENST00000476849 TSGA10-009 processed_transcript Homo_sapiens 0 459
ENST00000478090 TSGA10-006 processed_transcript Homo_sapiens 0 1592
ENST00000488960 TSGA10-015 processed_transcript Homo_sapiens 0 1014
ENST00000489546 TSGA10-008 processed_transcript Homo_sapiens 0 833
ENST00000489926 TSGA10-014 processed_transcript Homo_sapiens 0 538
ENST00000494483 TSGA10-011 processed_transcript Homo_sapiens 0 289
ENST00000497915 TSGA10-013 processed_transcript Homo_sapiens 0 616

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