C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kin of IRRE like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115148 Kirrel3-201 ENSMUSG00000032036 10090 + 9:34486126-35035280 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverMuscleOvaryENSMUST00000115148
Transcript ID Adipose Breast Colon Heart Kidney Liver Muscle Ovary
ENSMUST00000115148 0.122±0.08 0.141±0.09 0.171±0.02 0.193±0.00 0.051±0.02 0.011±0.00 0.075±0.00 0.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086K CIL_00086K_0002 VISTA 9:34257589-34859390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0002121 IMP inter-male aggressive behavior
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005886 IDA plasma membrane
GO:0016021 IEA:IDA integral component of membrane
GO:0021740 IMP principal sensory nucleus of trigeminal nerve development
GO:0030097 IDA hemopoiesis
GO:0030165 NAS PDZ domain binding
GO:0030424 IDA axon
GO:0043198 IDA dendritic shaft
GO:0048812 IMP neuron projection morphogenesis
GO:0072102 IMP glomerulus morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000416561 KIRREL3-201 protein_coding Homo_sapiens 0 1827
ENST00000525144 KIRREL3-001 protein_coding Homo_sapiens 0 2061
ENST00000525704 KIRREL3-003 protein_coding Homo_sapiens 0 2145
ENST00000526519 KIRREL3-007 processed_transcript Homo_sapiens 0 667
ENST00000529097 KIRREL3-004 protein_coding Homo_sapiens 0 3013
ENST00000532647 KIRREL3-006 processed_transcript Homo_sapiens 0 665
ENST00000533026 KIRREL3-002 processed_transcript Homo_sapiens 0 553
ENST00000547738 KIRREL3-009 processed_transcript Homo_sapiens 0 494
ENST00000549874 KIRREL3-008 processed_transcript Homo_sapiens 0 392

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