C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00086K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1396 VISTA 9606 11:126628051-127230760
GeneTranscriptPositionBiotype
ENSG00000149571 (KIRREL3)
kin of IRRE like 3 (Drosophila) 		ENST00000416561 (KIRREL3-201) 126423359-126562917 protein_coding
ENST00000525144 (KIRREL3-001) 126423359-127000759 protein_coding
ENST00000525704 (KIRREL3-003) 126430942-127000810 protein_coding
ENST00000526519 (KIRREL3-007) 126429179-126440869 processed_transcript
ENST00000526764 (KIRREL3-005) 126436864-126440818 retained_intron
ENST00000529097 (KIRREL3-004) 126423495-127000520 protein_coding
ENST00000532647 (KIRREL3-006) 126429179-126440882 processed_transcript
ENST00000533026 (KIRREL3-002) 126549284-127003460 processed_transcript
ENST00000547738 (KIRREL3-009) 126549418-127001165 processed_transcript
ENST00000549874 (KIRREL3-008) 126549539-127000770 processed_transcript
ENSG00000218109 (KIRREL3-AS3)
KIRREL3 antisense RNA 3 		ENST00000404882 (KIRREL3-AS3-201) 127003403-127004235 pseudogene
ENST00000525678 (KIRREL3-AS3-001) 127002910-127006058 antisense
ENSG00000254607 (RP11-115C10.1)
 ENST00000534620 (RP11-115C10.1-001) 126656086-126682104 antisense
ENST00000550747 (RP11-115C10.1-002) 126652852-126682103 antisense
ENSG00000254938 (RP11-688I9.4)
 ENST00000530572 (RP11-688I9.4-001) 126920188-126940659 lincRNA
ENSG00000254960 (KIRREL3-AS2)
KIRREL3 antisense RNA 2 		ENST00000532988 (KIRREL3-AS2-001) 126940746-126945088 antisense
ENST00000578084 (KIRREL3-AS2-002) 126940794-126945090 antisense
ENSG00000255087 (RP11-168K9.2)
 ENST00000527317 (RP11-168K9.2-001) 127067002-127101320 lincRNA
ENSG00000255317 (RP11-688I9.2)
 ENST00000531585 (RP11-688I9.2-001) 126992452-126995458 antisense
ENSG00000255546 (RP11-168K9.1)
 ENST00000530177 (RP11-168K9.1-001) 127021754-127053553 lincRNA
ENSG00000272981 (CTD-2234N14.2)
 ENST00000609688 (CTD-2234N14.2-001) 127119326-127139735 lincRNA
ENSG00000279358 (RP11-688I9.5)
 ENST00000625075 (RP11-688I9.5-001) 126934886-126937150 TEC
CIL_00086K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1396 VISTA 10090 9:34257589-34859390
GeneTranscriptPositionBiotype
ENSMUSG00000032036 (Kirrel3)
kin of IRRE like 3 (Drosophila) 		ENSMUST00000045091 (Kirrel3-002) 34488795-35036716 protein_coding
ENSMUST00000115148 (Kirrel3-201) 34486126-35035280 protein_coding
ENSMUST00000183580 (Kirrel3-007) 34486125-34510616 processed_transcript
ENSMUST00000184203 (Kirrel3-008) 34485894-34489158 protein_coding
ENSMUST00000187182 (Kirrel3-006) 34488936-35036310 protein_coding
ENSMUST00000187625 (Kirrel3-001) 34488733-35036716 protein_coding
ENSMUST00000188658 (Kirrel3-004) 35016452-35030876 protein_coding
ENSMUST00000188933 (Kirrel3-005) 34488828-35036310 protein_coding
ENSMUST00000190549 (Kirrel3-003) 34488795-35030878 protein_coding
ENSMUSG00000097355 (Gm26662)
predicted gene, 26662 		ENSMUST00000181129 (Gm26662-201) 34588526-34589304 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00086K_0001ENSG00000149571ENST00000416561ENST00000525144ENST00000525704ENST00000526519ENST00000526764ENST00000529097ENST00000532647ENST00000533026ENST00000547738ENST00000549874ENSG00000218109ENST00000404882ENST00000525678ENSG00000254607ENST00000534620ENST00000550747ENSG00000254938ENST00000530572ENSG00000254960ENST00000532988ENST00000578084ENSG00000255087ENST00000527317ENSG00000255317ENST00000531585ENSG00000255546ENST00000530177ENSG00000272981ENST00000609688ENSG00000279358ENST00000625075CIL_00086K_0002ENSMUSG00000032036ENSMUST00000045091ENSMUST00000115148ENSMUST00000183580ENSMUST00000184203ENSMUST00000187182ENSMUST00000187625ENSMUST00000188658ENSMUST00000188933ENSMUST00000190549ENSMUSG00000097355ENSMUST00000181129
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00086K_0001ENSG00000149571ENST00000416561ENST00000525144ENST00000525704ENST00000526764ENST00000529097ENST00000532647ENST00000533026ENST00000547738ENST00000549874ENSG00000218109ENST00000404882ENST00000525678ENSG00000254607ENST00000534620ENST00000550747ENSG00000254938ENST00000530572ENSG00000254960ENST00000532988ENST00000578084ENSG00000255087ENST00000527317ENSG00000255317ENST00000531585ENSG00000255546ENST00000530177ENSG00000272981ENST00000609688ENSG00000279358ENST00000625075CIL_00086K_0002ENSMUSG00000032036ENSMUST00000045091ENSMUST00000115148ENSMUST00000187182ENSMUST00000187625ENSMUST00000188658ENSMUST00000188933ENSMUST00000190549ENSMUSG00000097355ENSMUST00000181129
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149571 ENST00000416561 N/A 0.107±0.00 N/A N/A 0.193±0.00 N/A N/A N/A 0.036±0.00 N/A N/A 0.659±0.63 0.185±0.10 N/A
ENST00000525144 N/A N/A N/A 1.246±0.00 0.173±0.00 0.137±0.00 N/A N/A N/A N/A N/A N/A 0.267±0.14 0.121±0.00
ENST00000525704 N/A N/A N/A N/A 0.138±0.00 N/A 0.040±0.00 0.050±0.00 N/A N/A 0.046±0.00 0.020±0.00 N/A 0.144±0.00
ENST00000526519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526764 N/A N/A N/A N/A 0.304±0.00 N/A N/A 0.088±0.00 0.245±0.00 N/A N/A 0.367±0.00 0.300±0.00 0.528±0.00
ENST00000529097 0.056±0.00 N/A N/A N/A N/A 0.688±0.00 0.042±0.01 0.143±0.00 0.214±0.00 0.038±0.00 N/A N/A N/A 0.174±0.00
ENST00000532647 N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A 0.836±0.00 N/A 0.301±0.00 N/A N/A
ENST00000533026 0.243±0.00 N/A N/A N/A 0.109±0.00 0.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A
ENST00000549874 N/A 0.464±0.00 N/A N/A 0.079±0.00 N/A 0.180±0.00 0.057±0.00 0.037±0.00 0.185±0.00 0.119±0.00 N/A N/A 0.213±0.00
ENSG00000218109 ENST00000404882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.559±0.00
ENST00000525678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.275±0.00
ENSG00000254607 ENST00000534620 N/A 0.032±0.00 N/A 0.055±0.00 0.014±0.00 N/A N/A 3.800±0.00 1.678±0.00 0.380±0.00 N/A N/A N/A 0.150±0.00
ENST00000550747 N/A 0.025±0.00 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A 0.520±0.37 N/A 0.080±0.00
ENSG00000254938 ENST00000530572 N/A N/A N/A 0.125±0.00 0.464±0.44 N/A 0.057±0.00 N/A N/A N/A N/A N/A 0.058±0.00 0.526±0.01
ENSG00000254960 ENST00000532988 N/A N/A N/A N/A 0.029±0.00 N/A 0.080±0.00 N/A N/A N/A 2.692±0.00 N/A 0.106±0.00 2.420±0.53
ENST00000578084 N/A 0.145±0.00 N/A 0.039±0.00 0.628±0.00 1.025±0.00 N/A N/A N/A N/A N/A N/A N/A 5.600±1.99
ENSG00000255087 ENST00000527317 0.063±0.00 0.125±0.00 N/A 0.130±0.00 0.068±0.00 0.052±0.00 0.042±0.00 0.028±0.01 0.019±0.00 0.015±0.00 N/A 0.003±0.00 N/A 0.189±0.00
ENSG00000255317 ENST00000531585 N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.160±0.00 0.258±0.16
ENSG00000255546 ENST00000530177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 3.547±2.63
ENSG00000272981 ENST00000609688 N/A N/A N/A 0.530±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00
ENSG00000279358 ENST00000625075 N/A 0.012±0.00 N/A 0.211±0.14 0.087±0.08 0.241±0.23 0.011±0.00 N/A 0.109±0.00 0.103±0.08 0.389±0.00 N/A N/A 0.008±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032036 ENSMUST00000045091 N/A 0.127±0.06 N/A N/A N/A N/A N/A N/A N/A 0.230±0.00 0.076±0.00 0.395±0.07 N/A N/A
ENSMUST00000115148 0.122±0.08 N/A N/A N/A 0.141±0.09 0.171±0.02 0.193±0.00 0.051±0.02 0.011±0.00 N/A 0.075±0.00 0.205±0.00 N/A N/A
ENSMUST00000183580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187182 N/A 0.181±0.03 N/A N/A N/A 0.125±0.00 0.178±0.11 0.099±0.06 N/A N/A 0.158±0.08 0.222±0.02 0.377±0.31 0.114±0.02
ENSMUST00000187625 0.128±0.09 N/A 0.028±0.01 1.736±0.35 0.091±0.00 0.130±0.00 0.050±0.00 N/A 0.081±0.00 N/A 0.082±0.00 0.522±0.00 0.070±0.06 0.077±0.03
ENSMUST00000188658 N/A 0.261±0.06 0.034±0.00 N/A N/A N/A N/A N/A 0.049±0.03 N/A 0.059±0.02 0.246±0.03 N/A 0.037±0.00
ENSMUST00000188933 0.545±0.36 N/A 0.059±0.02 10.579±4.16 0.330±0.15 0.213±0.07 0.127±0.03 0.176±0.06 N/A 0.306±0.02 0.114±0.03 0.326±0.13 0.457±0.40 N/A
ENSMUST00000190549 N/A 0.084±0.00 N/A N/A 0.118±0.03 N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.029±0.00 N/A
ENSMUSG00000097355 ENSMUST00000181129 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.491±2.52

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