C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-phosphoinositide dependent protein kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115407 Pdpk1-006 ENSMUSG00000024122 10090 - 17:24078881-24141576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENSMUST00000115407
Transcript ID Adrenal Breast Colon Lung Ovary
ENSMUST00000115407 11.864±3.53 7.186±1.17 5.816±1.93 4.807±0.00 6.917±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ER CIL_0005ER_0002 CGP 17:24047734-24150924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004676 IDA 3-phosphoinositide-dependent protein kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006972 IDA hyperosmotic response
GO:0007165 TAS signal transduction
GO:0016023 IDA cytoplasmic membrane-bounded vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268673 PDPK1-002 protein_coding Homo_sapiens 0 470
ENST00000342085 PDPK1-001 protein_coding Homo_sapiens 0 1722
ENST00000382326 PDPK2P-002 processed_transcript Homo_sapiens 0 1282
ENST00000389224 PDPK1-003 protein_coding Homo_sapiens 0 1504
ENST00000441549 PDPK1-013 protein_coding Homo_sapiens 0 2034
ENST00000460496 PDPK1-009 processed_transcript Homo_sapiens 0 385
ENST00000461815 PDPK1-008 protein_coding Homo_sapiens 0 503
ENST00000462923 PDPK1-016 processed_transcript Homo_sapiens 0 207
ENST00000464702 PDPK1-010 processed_transcript Homo_sapiens 0 377
ENST00000471311 PDPK1-011 processed_transcript Homo_sapiens 0 302
ENST00000474706 PDPK1-006 nonsense_mediated_decay Homo_sapiens 0 263
ENST00000491073 PDPK1-005 retained_intron Homo_sapiens 0 1277
ENST00000492021 PDPK1-007 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000562415 PDPK2P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1197
ENST00000566659 PDPK1-015 protein_coding Homo_sapiens 0 383
ENST00000570136 PDPK1-014 retained_intron Homo_sapiens 0 436
ENST00000571865 PDPK2P-003 processed_transcript Homo_sapiens 0 219

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