C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-phosphoinositide dependent protein kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115409 Pdpk1-007 ENSMUSG00000024122 10090 - 17:24075812-24141570 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000115409
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000115409 3.555±0.23 11.001±3.27 7.379±0.75 5.563±1.73 1.887±0.04 3.369±1.45 1.965±0.58 4.499±0.31 7.025±1.97 1.571±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ER CIL_0005ER_0002 CGP 17:24047734-24150924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004676 IDA 3-phosphoinositide-dependent protein kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006972 IDA hyperosmotic response
GO:0007165 TAS signal transduction
GO:0016023 IDA cytoplasmic membrane-bounded vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268673 PDPK1-002 protein_coding Homo_sapiens 0 1934
ENST00000342085 PDPK1-001 protein_coding Homo_sapiens 0 1467
ENST00000382326 PDPK2P-002 processed_transcript Homo_sapiens 0 268
ENST00000389224 PDPK1-003 protein_coding Homo_sapiens 0 1334
ENST00000441549 PDPK1-013 protein_coding Homo_sapiens 0 470
ENST00000460496 PDPK1-009 processed_transcript Homo_sapiens 0 263
ENST00000461815 PDPK1-008 protein_coding Homo_sapiens 0 263
ENST00000462923 PDPK1-016 processed_transcript Homo_sapiens 0 207
ENST00000474706 PDPK1-006 nonsense_mediated_decay Homo_sapiens 0 263
ENST00000491073 PDPK1-005 retained_intron Homo_sapiens 0 263
ENST00000492021 PDPK1-007 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000566659 PDPK1-015 protein_coding Homo_sapiens 0 209
ENST00000570136 PDPK1-014 retained_intron Homo_sapiens 0 436

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