C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein cytoplasmic 1 intermediate chain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115554 Dync1i1-004 ENSMUSG00000029757 10090 + 6:5725812-6028039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115554
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115554 0.491±0.55 0.677±0.37 0.100±0.00 1.205±0.26 0.134±0.02 1.122±0.31 0.149±0.02 0.465±0.08 0.030±0.03 0.101±0.00 0.042±0.01 6.334±4.10 0.160±0.09 3.093±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H4 CIL_0008H4_0002 VISTA 6:5207995-5812142
CIL_00053G CIL_00053G_0002 CGP 6:5483351-6028039
CIL_0008AS CIL_0008AS_0002 VISTA 6:5697407-6297858
CIL_0008Z2 CIL_0008Z2_0002 VISTA 6:5705995-6306609
CIL_00053F CIL_00053F_0002 CGP 6:5725639-6217173

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0000922 ISS spindle pole
GO:0003777 ISS microtubule motor activity
GO:0005515 IPI protein binding
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0008017 ISS microtubule binding
GO:0008152 ISS metabolic process
GO:0030286 TAS dynein complex
GO:0030507 ISO spectrin binding
GO:0031982 ISS vesicle
GO:0047496 ISS vesicle transport along microtubule
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092571 dync1i2b-201 protein_coding Danio_rerio 0 603
ENSDART00000086409 dync1i1-001 protein_coding Danio_rerio 2.00386e-43 182
ENST00000324972 DYNC1I1-004 protein_coding Homo_sapiens 0 2484
ENST00000359388 DYNC1I1-007 protein_coding Homo_sapiens 0 2939
ENST00000413338 DYNC1I1-003 protein_coding Homo_sapiens 0 464
ENST00000437599 DYNC1I1-005 protein_coding Homo_sapiens 0 2638
ENST00000447467 DYNC1I1-001 protein_coding Homo_sapiens 0 2484
ENST00000457059 DYNC1I1-002 protein_coding Homo_sapiens 0 2246
ENST00000497626 DYNC1I1-006 processed_transcript Homo_sapiens 0 599
ENST00000518089 DYNC1I1-008 protein_coding Homo_sapiens 0 457
ENST00000519371 DYNC1I1-010 processed_transcript Homo_sapiens 0 918
ENST00000524053 DYNC1I1-009 protein_coding Homo_sapiens 0 363
ENST00000537881 DYNC1I1-201 protein_coding Homo_sapiens 0 1901

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