C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein cytoplasmic 1 intermediate chain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115556 Dync1i1-001 ENSMUSG00000029757 10090 + 6:5725639-6028039 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungENSMUST00000115556
Transcript ID Adrenal Brain Lung
ENSMUST00000115556 0.107±0.03 2.425±1.94 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H4 CIL_0008H4_0002 VISTA 6:5207995-5812142
CIL_00053G CIL_00053G_0002 CGP 6:5483351-6028039
CIL_0008AS CIL_0008AS_0002 VISTA 6:5697407-6297858
CIL_0008Z2 CIL_0008Z2_0002 VISTA 6:5705995-6306609
CIL_00053F CIL_00053F_0002 CGP 6:5725639-6217173

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005868 IEA cytoplasmic dynein complex
GO:0007018 IEA microtubule-based movement
GO:0030286 TAS dynein complex
GO:0030507 ISO spectrin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092571 dync1i2b-201 protein_coding Danio_rerio 0 603
ENST00000324972 DYNC1I1-004 protein_coding Homo_sapiens 0 2691
ENST00000359388 DYNC1I1-007 protein_coding Homo_sapiens 0 2484
ENST00000413338 DYNC1I1-003 protein_coding Homo_sapiens 0 309
ENST00000437599 DYNC1I1-005 protein_coding Homo_sapiens 0 2484
ENST00000447467 DYNC1I1-001 protein_coding Homo_sapiens 0 2691
ENST00000457059 DYNC1I1-002 protein_coding Homo_sapiens 0 2453
ENST00000497626 DYNC1I1-006 processed_transcript Homo_sapiens 0 599
ENST00000518089 DYNC1I1-008 protein_coding Homo_sapiens 0 303
ENST00000519371 DYNC1I1-010 processed_transcript Homo_sapiens 0 918
ENST00000524053 DYNC1I1-009 protein_coding Homo_sapiens 0 309
ENST00000537881 DYNC1I1-201 protein_coding Homo_sapiens 0 2108

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