C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein cytoplasmic 1 intermediate chain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115559 Dync1i1-003 ENSMUSG00000029757 10090 + 6:5725791-6028039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLungOvaryTestisENSMUST00000115559
Transcript ID Adrenal Brain Colon Kidney Lung Ovary Testis
ENSMUST00000115559 0.341±0.17 14.272±14.74 0.559±0.02 0.274±0.12 0.129±0.00 5.605±2.11 0.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H4 CIL_0008H4_0002 VISTA 6:5207995-5812142
CIL_00053G CIL_00053G_0002 CGP 6:5483351-6028039
CIL_0008AS CIL_0008AS_0002 VISTA 6:5697407-6297858
CIL_0008Z2 CIL_0008Z2_0002 VISTA 6:5705995-6306609
CIL_00053F CIL_00053F_0002 CGP 6:5725639-6217173

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0000922 ISS spindle pole
GO:0003777 ISS microtubule motor activity
GO:0005515 IPI protein binding
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0008017 ISS microtubule binding
GO:0008152 ISS metabolic process
GO:0030286 TAS dynein complex
GO:0030507 ISO spectrin binding
GO:0031982 ISS vesicle
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0047496 ISS vesicle transport along microtubule
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086409 dync1i1-001 protein_coding Danio_rerio 0 832
ENSDART00000092571 dync1i2b-201 protein_coding Danio_rerio 0 616
ENST00000324972 DYNC1I1-004 protein_coding Homo_sapiens 0 2748
ENST00000359388 DYNC1I1-007 protein_coding Homo_sapiens 0 2484
ENST00000413338 DYNC1I1-003 protein_coding Homo_sapiens 0 459
ENST00000437599 DYNC1I1-005 protein_coding Homo_sapiens 0 2484
ENST00000447467 DYNC1I1-001 protein_coding Homo_sapiens 0 3049
ENST00000457059 DYNC1I1-002 protein_coding Homo_sapiens 0 2808
ENST00000497626 DYNC1I1-006 processed_transcript Homo_sapiens 0 599
ENST00000518089 DYNC1I1-008 protein_coding Homo_sapiens 0 566
ENST00000519371 DYNC1I1-010 processed_transcript Homo_sapiens 0 918
ENST00000524053 DYNC1I1-009 protein_coding Homo_sapiens 0 363
ENST00000537881 DYNC1I1-201 protein_coding Homo_sapiens 0 2466

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