C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115582 Fgf1-002 ENSMUSG00000036585 10090 - 18:38840177-38866747 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverPlacentaTestisENSMUST00000115582
Transcript ID Bladder Liver Placenta Testis
ENSMUST00000115582 1.515±0.00 1.196±0.24 2.121±1.16 0.078±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001759 IDA organ induction
GO:0001934 IDA positive regulation of protein phosphorylation
GO:0005104 IEA:ISS fibroblast growth factor receptor binding
GO:0005515 IPI protein binding
GO:0005576 IDA:ISS extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005829 ISS cytosol
GO:0008083 ISS growth factor activity
GO:0008201 ISS heparin binding
GO:0008284 ISS positive regulation of cell proliferation
GO:0008543 IEA:ISS fibroblast growth factor receptor signaling pathway
GO:0030324 IDA lung development
GO:0030335 ISS positive regulation of cell migration
GO:0034605 ISS cellular response to heat
GO:0044548 ISS S100 protein binding
GO:0045542 ISS positive regulation of cholesterol biosynthetic process
GO:0045766 ISS positive regulation of angiogenesis
GO:0045893 TAS positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0050679 IDA positive regulation of epithelial cell proliferation
GO:0051781 ISS positive regulation of cell division
GO:0060038 TAS cardiac muscle cell proliferation
GO:0060681 ISS branch elongation involved in ureteric bud branching
GO:0060979 TAS vasculogenesis involved in coronary vascular morphogenesis
GO:0072163 ISS mesonephric epithelium development
GO:1902533 ISS positive regulation of intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337706 FGF1-002 protein_coding Homo_sapiens 0 737
ENST00000359370 FGF1-001 protein_coding Homo_sapiens 0 737
ENST00000360966 FGF1-007 protein_coding Homo_sapiens 0 287
ENST00000378046 FGF1-008 protein_coding Homo_sapiens 0 737
ENST00000394496 FGF1-004 protein_coding Homo_sapiens 0 255
ENST00000407758 FGF1-009 protein_coding Homo_sapiens 0 617
ENST00000419524 FGF1-010 protein_coding Homo_sapiens 0 651
ENST00000441680 FGF1-006 protein_coding Homo_sapiens 0 651
ENST00000489937 FGF1-003 retained_intron Homo_sapiens 0 265
ENST00000494344 FGF1-012 retained_intron Homo_sapiens 0 651
ENST00000494579 FGF1-011 processed_transcript Homo_sapiens 0 407
ENST00000610990 FGF1-201 protein_coding Homo_sapiens 0 737
ENST00000612258 FGF1-202 protein_coding Homo_sapiens 0 737
ENST00000619447 FGF1-203 protein_coding Homo_sapiens 0 737
ENST00000621536 FGF1-204 protein_coding Homo_sapiens 0 737

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