C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of variegation 3-9 homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115637 Suv39h1-002 ENSMUSG00000039231 10090 - X:8061435-8074258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115637 5.188±1.47 3.953±0.43 2.920±0.30 5.688±2.48 5.525±1.37 4.039±0.73 1.547±0.08 3.596±0.37 7.565±6.28 4.738±0.42 1.323±0.54 12.069±4.13 8.720±4.12 3.024±0.78

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000183 IEA chromatin silencing at rDNA
GO:0000792 IEA heterochromatin
GO:0005677 IEA chromatin silencing complex
GO:0005720 TAS nuclear heterochromatin
GO:0006323 TAS DNA packaging
GO:0008270 IEA zinc ion binding
GO:0008276 TAS protein methyltransferase activity
GO:0008757 IEA S-adenosylmethionine-dependent methyltransferase activity
GO:0018024 IGI histone-lysine N-methyltransferase activity
GO:0033553 IEA rDNA heterochromatin
GO:0034968 IGI histone lysine methylation
GO:0042054 IEA histone methyltransferase activity
GO:0046974 IEA histone methyltransferase activity (H3-K9 specific)
GO:0047485 IEA protein N-terminus binding
GO:0051567 IGI histone H3-K9 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337852 SUV39H1-201 protein_coding Homo_sapiens 0 1557
ENST00000376687 SUV39H1-001 protein_coding Homo_sapiens 0 1557
ENST00000462786 SUV39H1-003 retained_intron Homo_sapiens 0 475
ENST00000482260 SUV39H1-002 processed_transcript Homo_sapiens 0 691

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