C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride channel 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115746 Clcn5-004 ENSMUSG00000004317 10090 - X:7159469-7319233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverTestisENSMUST00000115746
Transcript ID Brain Liver Testis
ENSMUST00000115746 0.519±0.00 0.212±0.00 0.162±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005524 IEA ATP binding
GO:0005765 IEA lysosomal membrane
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006821 IEA chloride transport
GO:0006897 IMP endocytosis
GO:0015297 IEA antiporter activity
GO:0016021 IEA integral component of membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0034220 IEA ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000029725 clcn5-201 protein_coding Danio_rerio 0 424
ENSDART00000148502 clcn5-001 protein_coding Danio_rerio 0 424
ENST00000307367 CLCN5-003 protein_coding Homo_sapiens 0 3422
ENST00000376088 CLCN5-001 protein_coding Homo_sapiens 0 3666
ENST00000376091 CLCN5-002 protein_coding Homo_sapiens 0 3814
ENST00000376108 CLCN5-004 protein_coding Homo_sapiens 0 3367
ENST00000380829 CLCN4-003 protein_coding Homo_sapiens 0 453
ENST00000380833 CLCN4-001 protein_coding Homo_sapiens 0 771
ENST00000421085 CLCN4-201 protein_coding Homo_sapiens 0 771

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