C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116234 Arl1-001 ENSMUSG00000060904 10090 + 10:88731068-88744094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116234 10.031±7.90 7.110±1.30 63.263±8.01 15.647±9.53 5.496±4.95 22.918±4.50 4.464±0.57 3.581±1.01 12.624±11.32 15.612±7.55 31.137±8.66 13.411±2.77 36.914±14.75 12.700±6.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005525 IEA:ISS GTP binding
GO:0005737 IDA cytoplasm
GO:0005794 ISS Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0006184 ISS GTP catabolic process
GO:0007030 ISS Golgi organization
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008047 ISS enzyme activator activity
GO:0009404 ISS toxin metabolic process
GO:0016020 IEA membrane
GO:0019904 IEA protein domain specific binding
GO:0031584 ISS activation of phospholipase D activity
GO:0034067 ISS protein localization to Golgi apparatus
GO:0042147 ISS retrograde transport, endosome to Golgi
GO:0046872 IEA metal ion binding
GO:0048193 IEA Golgi vesicle transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255226 SLC14A2-001 protein_coding Homo_sapiens 0.00002 57
ENST00000261636 ARL1-001 protein_coding Homo_sapiens 0 972
ENST00000319688 KIDINS220-005 protein_coding Homo_sapiens 0 294
ENST00000369244 FBXL4-001 protein_coding Homo_sapiens 0.00004 57
ENST00000389912 COX16-001 protein_coding Homo_sapiens 0.0001 53
ENST00000536227 ARL1-005 protein_coding Homo_sapiens 0 941
ENST00000539055 ARL1-004 protein_coding Homo_sapiens 0 760
ENST00000549283 ARL1-009 processed_transcript Homo_sapiens 0 496
ENST00000549302 ARL1-006 processed_transcript Homo_sapiens 0 217
ENST00000550597 ARL1-012 retained_intron Homo_sapiens 0 468
ENST00000551092 ARL1-013 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000551671 ARL1-007 protein_coding Homo_sapiens 0 756
ENST00000551688 ARL1-008 protein_coding Homo_sapiens 0 298
ENST00000551828 ARL1-011 protein_coding Homo_sapiens 0 756

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