C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GATA zinc finger domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116463 Gatad2a-202 ENSMUSG00000036180 10090 - 8:69907069-69974383 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116463
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116463 7.536±1.08 5.329±0.46 3.664±0.94 2.607±0.18 4.747±1.78 5.045±0.39 2.740±0.19 6.069±1.34 2.437±1.12 6.976±1.90 2.503±0.76 9.836±2.60 9.639±1.32 4.108±1.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IMP blood vessel development
GO:0001701 IMP in utero embryonic development
GO:0001842 IMP neural fold formation
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0010172 IMP embryonic body morphogenesis
GO:0012501 IMP programmed cell death
GO:0016581 ISS NuRD complex
GO:0021506 IMP anterior neuropore closure
GO:0030674 ISS protein binding, bridging
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358713 GATAD2A-001 protein_coding Homo_sapiens 0 1764
ENST00000360315 GATAD2A-201 protein_coding Homo_sapiens 0 1764
ENST00000404158 GATAD2A-002 protein_coding Homo_sapiens 0 1812
ENST00000418032 GATAD2A-003 nonsense_mediated_decay Homo_sapiens 0 826
ENST00000457895 GATAD2A-006 protein_coding Homo_sapiens 3.9937e-43 182
ENST00000609040 GATAD2A-011 nonsense_mediated_decay Homo_sapiens 0 987

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