C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphatidylinositol glycan anchor biosynthesis, class T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117066 Pigt-003 ENSMUSG00000017721 10090 + 2:164497535-164503120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaENSMUST00000117066
Transcript ID Brain Breast Ovary Placenta
ENSMUST00000117066 8.611±0.00 4.852±0.00 3.898±0.00 5.844±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L0 CIL_0003L0_0002 CGP 2:164486106-164508301
CIL_0006IJ CIL_0006IJ_0002 CGP 2:164497520-164568510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016255 IEA attachment of GPI anchor to protein
GO:0030182 IDA neuron differentiation
GO:0042765 IEA GPI-anchor transamidase complex
GO:0051402 IDA neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279035 PIGT-004 protein_coding Homo_sapiens 0 854
ENST00000279036 PIGT-001 protein_coding Homo_sapiens 0 1408
ENST00000372689 PIGT-005 protein_coding Homo_sapiens 0 1147
ENST00000455050 PIGT-006 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000543458 PIGT-007 protein_coding Homo_sapiens 0 854
ENST00000545755 PIGT-008 protein_coding Homo_sapiens 0 357

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