C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117203 Med12-005 ENSMUSG00000079487 10090 + X:101274229-101297465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartMuscleOvaryPlacentaENSMUST00000117203
Transcript ID Breast Heart Muscle Ovary Placenta
ENSMUST00000117203 11.230±0.00 1.626±0.00 1.497±0.74 3.154±0.00 3.103±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057U CIL_00057U_0002 CGP X:101264378-101297465
CIL_00057X CIL_00057X_0002 CGP X:101274030-101325963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0001190 IGI RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription
GO:0001843 IMP neural tube closure
GO:0003682 IDA chromatin binding
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007507 IMP heart development
GO:0008013 IEA beta-catenin binding
GO:0008134 IPI transcription factor binding
GO:0014003 IMP oligodendrocyte development
GO:0014044 IMP Schwann cell development
GO:0016592 IDA mediator complex
GO:0019827 IMP stem cell maintenance
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0060070 IMP canonical Wnt signaling pathway
GO:0060071 IMP Wnt signaling pathway, planar cell polarity pathway
GO:0090245 IMP axis elongation involved in somitogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333646 MED12-201 protein_coding Homo_sapiens 0 9167
ENST00000374080 MED12-002 protein_coding Homo_sapiens 0 9105
ENST00000374102 MED12-001 protein_coding Homo_sapiens 0 9090
ENST00000429213 MED12-005 protein_coding Homo_sapiens 0 473
ENST00000444034 MED12-010 protein_coding Homo_sapiens 0 640
ENST00000460771 MED12-009 processed_transcript Homo_sapiens 0 468
ENST00000462984 MED12-007 processed_transcript Homo_sapiens 0 592
ENST00000471663 MED12-006 processed_transcript Homo_sapiens 0 516
ENST00000489199 MED12-008 processed_transcript Homo_sapiens 0 313

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